Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.2■□□□□ 0.66
NUP43Q8NFH3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 AC092667.1-201ENST00000434301 2586 ntBASIC19.19■□□□□ 0.66
NUP43Q8NFH3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 AC007322.3-201ENST00000426526 701 ntBASIC19.19■□□□□ 0.66
NUP43Q8NFH3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NUP43Q8NFH3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 KRT18P11-201ENST00000435214 1283 ntBASIC19.18■□□□□ 0.66
NUP43Q8NFH3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP43Q8NFH3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 AC016769.1-201ENST00000409132 1010 ntBASIC19.17■□□□□ 0.66
NUP43Q8NFH3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 TERF1P5-201ENST00000477545 1207 ntBASIC19.17■□□□□ 0.66
NUP43Q8NFH3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 AC010536.3-201ENST00000620306 533 ntBASIC19.17■□□□□ 0.66
NUP43Q8NFH3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
NUP43Q8NFH3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 CDV3P1-201ENST00000471403 739 ntBASIC19.16■□□□□ 0.66
NUP43Q8NFH3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 MIR5787-201ENST00000611784 55 ntBASIC19.16■□□□□ 0.66
NUP43Q8NFH3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NUP43Q8NFH3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms