Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM35BQ8NCS4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.74■■□□□ 1.07
TMEM35BQ8NCS4 AL157384.1-201ENST00000445995 2473 ntBASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TMEM35BQ8NCS4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 AL162412.1-201ENST00000567129 965 ntBASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 FAM21FP-204ENST00000608637 956 ntBASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.72■■□□□ 1.07
TMEM35BQ8NCS4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 MIR2861-201ENST00000636310 90 ntBASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM35BQ8NCS4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
TMEM35BQ8NCS4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
TMEM35BQ8NCS4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 CNN2P6-201ENST00000439038 900 ntBASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 AC073314.1-201ENST00000568729 2216 ntBASIC21.7■■□□□ 1.06
TMEM35BQ8NCS4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 AP005212.1-201ENST00000581547 1997 ntBASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEM35BQ8NCS4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms