Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LINC01555Q8NAE3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC01555Q8NAE3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.8■□□□□ 0.76
LINC01555Q8NAE3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.8■□□□□ 0.76
LINC01555Q8NAE3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC01555Q8NAE3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LINC01555Q8NAE3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 AC087633.2-202ENST00000565166 1439 ntBASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 AC098934.4-201ENST00000564127 592 ntBASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.79■□□□□ 0.76
LINC01555Q8NAE3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
LINC01555Q8NAE3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 KRT18P68-201ENST00000392293 1000 ntBASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01555Q8NAE3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.77■□□□□ 0.75
LINC01555Q8NAE3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 AC092118.2-201ENST00000613495 667 ntBASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 MIR2861-201ENST00000636310 90 ntBASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 AL121603.2-201ENST00000557373 2117 ntBASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01555Q8NAE3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01555Q8NAE3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LINC01555Q8NAE3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01555Q8NAE3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms