Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 AC061975.6-201ENST00000579045 1553 ntBASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01561Q8N1V8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 AC120498.10-201ENST00000621827 505 ntBASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.74□□□□□ -0.21
LINC01561Q8N1V8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 AC099791.1-201ENST00000416440 715 ntBASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 AC012414.1-201ENST00000556676 535 ntBASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 AC008764.7-201ENST00000593779 1081 ntBASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 MIR2861-201ENST00000636310 90 ntBASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01561Q8N1V8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 RARRES2P11-201ENST00000635158 484 ntBASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
LINC01561Q8N1V8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms