Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC087499.1-201ENST00000418141 1075 ntBASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 TSPY15P-201ENST00000457163 923 ntBASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 AC120498.8-201ENST00000614275 531 ntBASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL27A1Q8IZC6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.52■□□□□ 0.71
COL27A1Q8IZC6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.52■□□□□ 0.71
COL27A1Q8IZC6 PGM5P4-201ENST00000421970 445 ntBASIC19.52■□□□□ 0.71
COL27A1Q8IZC6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL27A1Q8IZC6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.52■□□□□ 0.71
COL27A1Q8IZC6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.52■□□□□ 0.71
COL27A1Q8IZC6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.52■□□□□ 0.71
COL27A1Q8IZC6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
COL27A1Q8IZC6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL27A1Q8IZC6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL27A1Q8IZC6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 RARRES2P10-201ENST00000564312 460 ntBASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 AC110285.5-201ENST00000611501 352 ntBASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL27A1Q8IZC6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 RCN1P1-201ENST00000400413 996 ntBASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 FAM210CP-201ENST00000445714 574 ntBASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 AC010331.1-201ENST00000611423 582 ntBASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
COL27A1Q8IZC6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 AC242852.2-201ENST00000615738 1807 ntBASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.49■□□□□ 0.71
COL27A1Q8IZC6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.48■□□□□ 0.71
COL27A1Q8IZC6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms