Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHPFQ8IZ52 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CHPFQ8IZ52 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.91■□□□□ 0.94
CHPFQ8IZ52 PNMA6B-201ENST00000538162 1200 ntBASIC20.91■□□□□ 0.94
CHPFQ8IZ52 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHPFQ8IZ52 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.91■□□□□ 0.94
CHPFQ8IZ52 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CHPFQ8IZ52 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.9■□□□□ 0.94
CHPFQ8IZ52 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.9■□□□□ 0.94
CHPFQ8IZ52 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHPFQ8IZ52 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CHPFQ8IZ52 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHPFQ8IZ52 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHPFQ8IZ52 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHPFQ8IZ52 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.89■□□□□ 0.94
CHPFQ8IZ52 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 AC008403.3-201ENST00000598924 454 ntBASIC20.89■□□□□ 0.93
CHPFQ8IZ52 AC105020.6-201ENST00000621523 1217 ntBASIC20.89■□□□□ 0.93
CHPFQ8IZ52 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHPFQ8IZ52 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHPFQ8IZ52 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 UNC93B4-201ENST00000505679 747 ntBASIC20.87■□□□□ 0.93
CHPFQ8IZ52 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.87■□□□□ 0.93
CHPFQ8IZ52 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms