Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE9Q8IYJ1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 AC073314.1-201ENST00000568729 2216 ntBASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 AC116050.2-201ENST00000612102 1779 ntBASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 AC243732.1-201ENST00000612648 864 ntBASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE9Q8IYJ1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE9Q8IYJ1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.27■□□□□ 0.83
CPNE9Q8IYJ1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.27■□□□□ 0.83
CPNE9Q8IYJ1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 AC091799.1-201ENST00000422823 811 ntBASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 AC137761.2-201ENST00000561729 223 ntBASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 AC145350.3-201ENST00000569033 163 ntBASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE9Q8IYJ1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE9Q8IYJ1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 AC027702.1-201ENST00000563810 1770 ntBASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 LINC01521-201ENST00000504184 1943 ntBASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 AP005212.1-201ENST00000581547 1997 ntBASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE9Q8IYJ1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 AL162430.1-201ENST00000480705 870 ntBASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE9Q8IYJ1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms