Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 AL162377.1-201ENST00000618844 1793 ntBASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 AC087623.3-201ENST00000607047 1098 ntBASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 AC112907.3-201ENST00000577781 2400 ntBASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CRLF3Q8IUI8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 AL512408.1-201ENST00000569378 2000 ntBASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 FP700111.2-201ENST00000619190 1892 ntBASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CRLF3Q8IUI8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CRLF3Q8IUI8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CRLF3Q8IUI8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CRLF3Q8IUI8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CRLF3Q8IUI8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CRLF3Q8IUI8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 MIR572-201ENST00000384983 95 ntBASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CRLF3Q8IUI8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CRLF3Q8IUI8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms