Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LDB1Q86U70 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LDB1Q86U70 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LDB1Q86U70 AP005212.1-201ENST00000581547 1997 ntBASIC20.48■□□□□ 0.87
LDB1Q86U70 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
LDB1Q86U70 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LDB1Q86U70 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LDB1Q86U70 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.48■□□□□ 0.87
LDB1Q86U70 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LDB1Q86U70 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.48■□□□□ 0.87
LDB1Q86U70 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LDB1Q86U70 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LDB1Q86U70 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LDB1Q86U70 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LDB1Q86U70 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LDB1Q86U70 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LDB1Q86U70 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
LDB1Q86U70 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LDB1Q86U70 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LDB1Q86U70 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LDB1Q86U70 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LDB1Q86U70 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LDB1Q86U70 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LDB1Q86U70 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
LDB1Q86U70 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LDB1Q86U70 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
LDB1Q86U70 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LDB1Q86U70 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.47■□□□□ 0.87
LDB1Q86U70 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LDB1Q86U70 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.47■□□□□ 0.87
LDB1Q86U70 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LDB1Q86U70 AC243732.1-201ENST00000612648 864 ntBASIC20.47■□□□□ 0.87
LDB1Q86U70 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LDB1Q86U70 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LDB1Q86U70 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LDB1Q86U70 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LDB1Q86U70 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LDB1Q86U70 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LDB1Q86U70 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.47■□□□□ 0.87
LDB1Q86U70 LINC01521-201ENST00000504184 1943 ntBASIC20.47■□□□□ 0.87
LDB1Q86U70 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LDB1Q86U70 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LDB1Q86U70 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LDB1Q86U70 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LDB1Q86U70 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
LDB1Q86U70 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.46■□□□□ 0.87
LDB1Q86U70 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDB1Q86U70 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDB1Q86U70 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.46■□□□□ 0.87
LDB1Q86U70 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDB1Q86U70 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.46■□□□□ 0.87
LDB1Q86U70 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.46■□□□□ 0.87
LDB1Q86U70 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDB1Q86U70 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
LDB1Q86U70 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.46■□□□□ 0.87
LDB1Q86U70 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.46■□□□□ 0.87
LDB1Q86U70 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.46■□□□□ 0.87
LDB1Q86U70 AC011767.1-201ENST00000617410 1153 ntBASIC20.46■□□□□ 0.87
LDB1Q86U70 AC010536.3-201ENST00000620306 533 ntBASIC20.46■□□□□ 0.87
LDB1Q86U70 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LDB1Q86U70 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LDB1Q86U70 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LDB1Q86U70 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDB1Q86U70 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LDB1Q86U70 AL391422.3-201ENST00000603791 2761 ntBASIC20.46■□□□□ 0.87
LDB1Q86U70 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
LDB1Q86U70 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
LDB1Q86U70 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LDB1Q86U70 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.45■□□□□ 0.86
LDB1Q86U70 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.45■□□□□ 0.86
LDB1Q86U70 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.45■□□□□ 0.86
LDB1Q86U70 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
LDB1Q86U70 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.45■□□□□ 0.86
LDB1Q86U70 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LDB1Q86U70 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LDB1Q86U70 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.45■□□□□ 0.86
LDB1Q86U70 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.45■□□□□ 0.86
LDB1Q86U70 AC016769.1-201ENST00000409132 1010 ntBASIC20.45■□□□□ 0.86
LDB1Q86U70 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.45■□□□□ 0.86
LDB1Q86U70 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
LDB1Q86U70 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.45■□□□□ 0.86
LDB1Q86U70 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.45■□□□□ 0.86
LDB1Q86U70 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LDB1Q86U70 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.45■□□□□ 0.86
LDB1Q86U70 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.45■□□□□ 0.86
LDB1Q86U70 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.45■□□□□ 0.86
LDB1Q86U70 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.44■□□□□ 0.86
LDB1Q86U70 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LDB1Q86U70 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LDB1Q86U70 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
LDB1Q86U70 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.44■□□□□ 0.86
LDB1Q86U70 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LDB1Q86U70 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.44■□□□□ 0.86
LDB1Q86U70 TERF1P5-201ENST00000477545 1207 ntBASIC20.44■□□□□ 0.86
LDB1Q86U70 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.44■□□□□ 0.86
LDB1Q86U70 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.44■□□□□ 0.86
LDB1Q86U70 MFSD11-216ENST00000590393 1141 ntBASIC20.44■□□□□ 0.86
LDB1Q86U70 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LDB1Q86U70 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LDB1Q86U70 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms