Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 AC142086.2-201ENST00000569753 217 ntBASIC19.68■□□□□ 0.74
RNF44Q7L0R7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 AF106564.1-201ENST00000607058 2553 ntBASIC19.67■□□□□ 0.74
RNF44Q7L0R7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 CYP21A1P-202ENST00000354927 1481 ntBASIC19.67■□□□□ 0.74
RNF44Q7L0R7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF44Q7L0R7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 MCRIP2P1-201ENST00000394346 511 ntBASIC19.66■□□□□ 0.74
RNF44Q7L0R7 AL355802.2-201ENST00000402069 882 ntBASIC19.66■□□□□ 0.74
RNF44Q7L0R7 MIPEPP3-201ENST00000412105 444 ntBASIC19.66■□□□□ 0.74
RNF44Q7L0R7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF44Q7L0R7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF44Q7L0R7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF44Q7L0R7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF44Q7L0R7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF44Q7L0R7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RNF44Q7L0R7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RNF44Q7L0R7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 AL138781.1-201ENST00000566567 1274 ntBASIC19.64■□□□□ 0.73
RNF44Q7L0R7 CYP2T3P-201ENST00000601990 817 ntBASIC19.64■□□□□ 0.73
RNF44Q7L0R7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF44Q7L0R7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms