Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.6■□□□□ 0.89
CDHR3Q6ZTQ4 AP004607.4-201ENST00000530158 1459 ntBASIC20.6■□□□□ 0.89
CDHR3Q6ZTQ4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDHR3Q6ZTQ4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDHR3Q6ZTQ4 AC004854.2-201ENST00000608450 1441 ntBASIC20.6■□□□□ 0.89
CDHR3Q6ZTQ4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 AC079140.4-201ENST00000507448 529 ntBASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.59■□□□□ 0.89
CDHR3Q6ZTQ4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 AC092437.1-201ENST00000624794 1048 ntBASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.58■□□□□ 0.89
CDHR3Q6ZTQ4 AC099778.1-201ENST00000568593 1911 ntBASIC20.58■□□□□ 0.88
CDHR3Q6ZTQ4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDHR3Q6ZTQ4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDHR3Q6ZTQ4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.58■□□□□ 0.88
CDHR3Q6ZTQ4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDHR3Q6ZTQ4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.58■□□□□ 0.88
CDHR3Q6ZTQ4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.58■□□□□ 0.88
CDHR3Q6ZTQ4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDHR3Q6ZTQ4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDHR3Q6ZTQ4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDHR3Q6ZTQ4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.54■□□□□ 0.88
CDHR3Q6ZTQ4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms