Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 AC026271.2-201ENST00000428091 497 ntBASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 TERF1P2-201ENST00000583350 1212 ntBASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 AL162377.1-201ENST00000618844 1793 ntBASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF111Q6ZNA4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 KRT18P14-201ENST00000534205 1250 ntBASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 AC087623.3-201ENST00000607047 1098 ntBASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF111Q6ZNA4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 AC055733.4-201ENST00000638462 1354 ntBASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 AC020907.5-201ENST00000624372 1936 ntBASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF111Q6ZNA4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 AC034268.1-201ENST00000441047 882 ntBASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 AC079140.4-201ENST00000507448 529 ntBASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 AC018445.3-201ENST00000624177 1945 ntBASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF111Q6ZNA4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 AL512408.1-201ENST00000569378 2000 ntBASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 MIR5787-201ENST00000611784 55 ntBASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms