Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC31.61■■■□□ 2.65
CD109Q6YHK3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC31.61■■■□□ 2.65
CD109Q6YHK3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
CD109Q6YHK3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
CD109Q6YHK3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC31.61■■■□□ 2.65
CD109Q6YHK3 AC068473.5-201ENST00000616428 2072 ntBASIC31.61■■■□□ 2.65
CD109Q6YHK3 UNC93B2-201ENST00000285383 730 ntBASIC31.6■■■□□ 2.65
CD109Q6YHK3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CD109Q6YHK3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CD109Q6YHK3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC31.6■■■□□ 2.65
CD109Q6YHK3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CD109Q6YHK3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC31.6■■■□□ 2.65
CD109Q6YHK3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC31.6■■■□□ 2.65
CD109Q6YHK3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
CD109Q6YHK3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CD109Q6YHK3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC31.6■■■□□ 2.65
CD109Q6YHK3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CD109Q6YHK3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC31.59■■■□□ 2.65
CD109Q6YHK3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
CD109Q6YHK3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC31.59■■■□□ 2.65
CD109Q6YHK3 AL031963.3-201ENST00000606441 850 ntBASIC31.59■■■□□ 2.65
CD109Q6YHK3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CD109Q6YHK3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CD109Q6YHK3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
CD109Q6YHK3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
CD109Q6YHK3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CD109Q6YHK3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
CD109Q6YHK3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
CD109Q6YHK3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC31.58■■■□□ 2.65
CD109Q6YHK3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC31.58■■■□□ 2.65
CD109Q6YHK3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.58■■■□□ 2.65
CD109Q6YHK3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.58■■■□□ 2.65
CD109Q6YHK3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC31.58■■■□□ 2.65
CD109Q6YHK3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CD109Q6YHK3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
CD109Q6YHK3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CD109Q6YHK3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC31.58■■■□□ 2.65
CD109Q6YHK3 AC073195.1-201ENST00000607241 877 ntBASIC31.58■■■□□ 2.65
CD109Q6YHK3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.65
CD109Q6YHK3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
CD109Q6YHK3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
CD109Q6YHK3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CD109Q6YHK3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CD109Q6YHK3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CD109Q6YHK3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CD109Q6YHK3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CD109Q6YHK3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CD109Q6YHK3 MIR1238-201ENST00000408483 83 ntBASIC31.57■■■□□ 2.64
CD109Q6YHK3 SLC25A3P1-201ENST00000443844 931 ntBASIC31.57■■■□□ 2.64
CD109Q6YHK3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC31.57■■■□□ 2.64
CD109Q6YHK3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
CD109Q6YHK3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC31.57■■■□□ 2.64
CD109Q6YHK3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CD109Q6YHK3 CYP2D8P-201ENST00000433633 1490 ntBASIC31.56■■■□□ 2.64
CD109Q6YHK3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CD109Q6YHK3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC31.56■■■□□ 2.64
CD109Q6YHK3 AC026471.6-201ENST00000622954 1905 ntBASIC31.56■■■□□ 2.64
CD109Q6YHK3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC31.56■■■□□ 2.64
CD109Q6YHK3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC31.56■■■□□ 2.64
CD109Q6YHK3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CD109Q6YHK3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CD109Q6YHK3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC31.55■■■□□ 2.64
CD109Q6YHK3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
CD109Q6YHK3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC31.55■■■□□ 2.64
CD109Q6YHK3 AL137013.1-201ENST00000432946 1228 ntBASIC31.55■■■□□ 2.64
CD109Q6YHK3 AC104076.2-201ENST00000448912 469 ntBASIC31.55■■■□□ 2.64
CD109Q6YHK3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CD109Q6YHK3 AC010947.1-201ENST00000623454 693 ntBASIC31.55■■■□□ 2.64
CD109Q6YHK3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CD109Q6YHK3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CD109Q6YHK3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC31.55■■■□□ 2.64
CD109Q6YHK3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CD109Q6YHK3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC31.54■■■□□ 2.64
CD109Q6YHK3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC31.54■■■□□ 2.64
CD109Q6YHK3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC31.54■■■□□ 2.64
CD109Q6YHK3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
CD109Q6YHK3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC31.54■■■□□ 2.64
CD109Q6YHK3 HES2-206ENST00000489730 730 ntTSL 2 BASIC31.54■■■□□ 2.64
CD109Q6YHK3 AL121829.2-201ENST00000620908 328 ntBASIC31.54■■■□□ 2.64
CD109Q6YHK3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
CD109Q6YHK3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CD109Q6YHK3 AC092053.2-201ENST00000640557 1818 ntBASIC31.54■■■□□ 2.64
CD109Q6YHK3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC31.54■■■□□ 2.64
CD109Q6YHK3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC31.53■■■□□ 2.64
CD109Q6YHK3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CD109Q6YHK3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CD109Q6YHK3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC31.53■■■□□ 2.64
CD109Q6YHK3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
CD109Q6YHK3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms