Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
DEPDC1Q5TB30 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 KRT18P5-201ENST00000436075 1291 ntBASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DEPDC1Q5TB30 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEPDC1Q5TB30 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DEPDC1Q5TB30 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 AC006128.1-201ENST00000624704 1661 ntBASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.78■□□□□ 0.76
DEPDC1Q5TB30 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
DEPDC1Q5TB30 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
DEPDC1Q5TB30 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DEPDC1Q5TB30 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.77■□□□□ 0.76
DEPDC1Q5TB30 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
DEPDC1Q5TB30 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DEPDC1Q5TB30 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
DEPDC1Q5TB30 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DEPDC1Q5TB30 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.77■□□□□ 0.76
DEPDC1Q5TB30 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DEPDC1Q5TB30 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.77■□□□□ 0.76
DEPDC1Q5TB30 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms