Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 AL591742.1-201ENST00000604433 565 ntBASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 AC016405.3-201ENST00000607710 860 ntBASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 IKBKGP1-201ENST00000612193 1073 ntBASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 BID-214ENST00000617586 542 ntTSL 5 BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CTSL3PQ5NE16 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSL3PQ5NE16 AC020907.5-201ENST00000624372 1936 ntBASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 FAM21FP-204ENST00000608637 956 ntBASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CTSL3PQ5NE16 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSL3PQ5NE16 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 AC068338.2-201ENST00000563278 1430 ntBASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 PKD1P6-201ENST00000343738 4769 ntBASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 AL162412.1-201ENST00000567129 965 ntBASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTSL3PQ5NE16 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms