Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CBWD6Q4V339 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CBWD6Q4V339 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.21■■□□□ 1.15
CBWD6Q4V339 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CBWD6Q4V339 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
CBWD6Q4V339 GABARAPL3-202ENST00000624044 1851 ntBASIC22.2■■□□□ 1.14
CBWD6Q4V339 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CBWD6Q4V339 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CBWD6Q4V339 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.2■■□□□ 1.14
CBWD6Q4V339 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.2■■□□□ 1.14
CBWD6Q4V339 AC007322.4-201ENST00000509611 723 ntBASIC22.2■■□□□ 1.14
CBWD6Q4V339 AC013268.1-206ENST00000638368 961 ntBASIC22.2■■□□□ 1.14
CBWD6Q4V339 AC112229.1-201ENST00000639295 961 ntBASIC22.2■■□□□ 1.14
CBWD6Q4V339 AC073130.3-201ENST00000624389 2278 ntBASIC22.2■■□□□ 1.14
CBWD6Q4V339 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CBWD6Q4V339 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CBWD6Q4V339 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CBWD6Q4V339 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CBWD6Q4V339 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CBWD6Q4V339 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CBWD6Q4V339 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CBWD6Q4V339 AL591742.1-201ENST00000604433 565 ntBASIC22.19■■□□□ 1.14
CBWD6Q4V339 AC016405.3-201ENST00000607710 860 ntBASIC22.19■■□□□ 1.14
CBWD6Q4V339 BID-214ENST00000617586 542 ntTSL 5 BASIC22.19■■□□□ 1.14
CBWD6Q4V339 MIR2861-201ENST00000636310 90 ntBASIC22.19■■□□□ 1.14
CBWD6Q4V339 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.19■■□□□ 1.14
CBWD6Q4V339 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CBWD6Q4V339 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
CBWD6Q4V339 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CBWD6Q4V339 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.19■■□□□ 1.14
CBWD6Q4V339 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.19■■□□□ 1.14
CBWD6Q4V339 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CBWD6Q4V339 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CBWD6Q4V339 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CBWD6Q4V339 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CBWD6Q4V339 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CBWD6Q4V339 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CBWD6Q4V339 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CBWD6Q4V339 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CBWD6Q4V339 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CBWD6Q4V339 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 CDV3P1-201ENST00000471403 739 ntBASIC22.18■■□□□ 1.14
CBWD6Q4V339 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CBWD6Q4V339 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CBWD6Q4V339 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.18■■□□□ 1.14
CBWD6Q4V339 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CBWD6Q4V339 AC020907.5-201ENST00000624372 1936 ntBASIC22.18■■□□□ 1.14
CBWD6Q4V339 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CBWD6Q4V339 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CBWD6Q4V339 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CBWD6Q4V339 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CBWD6Q4V339 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.17■■□□□ 1.14
CBWD6Q4V339 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
CBWD6Q4V339 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CBWD6Q4V339 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CBWD6Q4V339 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CBWD6Q4V339 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.17■■□□□ 1.14
CBWD6Q4V339 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.17■■□□□ 1.14
CBWD6Q4V339 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CBWD6Q4V339 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.17■■□□□ 1.14
CBWD6Q4V339 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CBWD6Q4V339 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CBWD6Q4V339 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CBWD6Q4V339 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CBWD6Q4V339 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.17■■□□□ 1.14
CBWD6Q4V339 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CBWD6Q4V339 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.17■■□□□ 1.14
CBWD6Q4V339 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.16■■□□□ 1.14
CBWD6Q4V339 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.16■■□□□ 1.14
CBWD6Q4V339 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.16■■□□□ 1.14
CBWD6Q4V339 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CBWD6Q4V339 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CBWD6Q4V339 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CBWD6Q4V339 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CBWD6Q4V339 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CBWD6Q4V339 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.16■■□□□ 1.14
CBWD6Q4V339 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CBWD6Q4V339 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CBWD6Q4V339 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CBWD6Q4V339 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CBWD6Q4V339 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.16■■□□□ 1.14
CBWD6Q4V339 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.16■■□□□ 1.14
CBWD6Q4V339 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CBWD6Q4V339 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.16■■□□□ 1.14
CBWD6Q4V339 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CBWD6Q4V339 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CBWD6Q4V339 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CBWD6Q4V339 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CBWD6Q4V339 AC068338.2-201ENST00000563278 1430 ntBASIC22.15■■□□□ 1.14
CBWD6Q4V339 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms