Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXC1Q12948 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXC1Q12948 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXC1Q12948 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.57■□□□□ 0.72
FOXC1Q12948 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
FOXC1Q12948 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.57■□□□□ 0.72
FOXC1Q12948 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXC1Q12948 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXC1Q12948 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FOXC1Q12948 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FOXC1Q12948 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC1Q12948 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC1Q12948 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC1Q12948 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC1Q12948 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC1Q12948 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC1Q12948 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXC1Q12948 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.56■□□□□ 0.72
FOXC1Q12948 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.56■□□□□ 0.72
FOXC1Q12948 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
FOXC1Q12948 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.56■□□□□ 0.72
FOXC1Q12948 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC1Q12948 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.56■□□□□ 0.72
FOXC1Q12948 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC1Q12948 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC1Q12948 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
FOXC1Q12948 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FOXC1Q12948 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
FOXC1Q12948 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
FOXC1Q12948 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXC1Q12948 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXC1Q12948 LIN28AP1-201ENST00000429574 405 ntBASIC19.55■□□□□ 0.72
FOXC1Q12948 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXC1Q12948 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FOXC1Q12948 KRT18P56-201ENST00000507275 550 ntBASIC19.55■□□□□ 0.72
FOXC1Q12948 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
FOXC1Q12948 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXC1Q12948 KRT126P-201ENST00000549467 1181 ntBASIC19.55■□□□□ 0.72
FOXC1Q12948 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
FOXC1Q12948 AC010947.1-201ENST00000623454 693 ntBASIC19.55■□□□□ 0.72
FOXC1Q12948 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXC1Q12948 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FOXC1Q12948 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
FOXC1Q12948 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXC1Q12948 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.55■□□□□ 0.72
FOXC1Q12948 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC1Q12948 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC1Q12948 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
FOXC1Q12948 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC1Q12948 ATP5G1P1-201ENST00000448724 379 ntBASIC19.54■□□□□ 0.72
FOXC1Q12948 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.54■□□□□ 0.72
FOXC1Q12948 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC1Q12948 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC1Q12948 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.54■□□□□ 0.72
FOXC1Q12948 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.54■□□□□ 0.72
FOXC1Q12948 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.54■□□□□ 0.72
FOXC1Q12948 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC1Q12948 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
FOXC1Q12948 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
FOXC1Q12948 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXC1Q12948 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXC1Q12948 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXC1Q12948 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.53■□□□□ 0.72
FOXC1Q12948 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXC1Q12948 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FOXC1Q12948 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.53■□□□□ 0.72
FOXC1Q12948 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.53■□□□□ 0.72
FOXC1Q12948 AL358472.4-201ENST00000633140 710 ntBASIC19.53■□□□□ 0.72
FOXC1Q12948 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXC1Q12948 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXC1Q12948 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXC1Q12948 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.53■□□□□ 0.72
FOXC1Q12948 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXC1Q12948 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.52■□□□□ 0.72
FOXC1Q12948 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
FOXC1Q12948 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXC1Q12948 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
FOXC1Q12948 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXC1Q12948 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXC1Q12948 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXC1Q12948 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXC1Q12948 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXC1Q12948 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
FOXC1Q12948 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXC1Q12948 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.52■□□□□ 0.72
FOXC1Q12948 AC091076.1-201ENST00000610741 619 ntBASIC19.52■□□□□ 0.72
FOXC1Q12948 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
FOXC1Q12948 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXC1Q12948 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
FOXC1Q12948 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXC1Q12948 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXC1Q12948 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXC1Q12948 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXC1Q12948 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXC1Q12948 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXC1Q12948 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXC1Q12948 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.51■□□□□ 0.71
FOXC1Q12948 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXC1Q12948 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXC1Q12948 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms