Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CCL20P78556 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.17■□□□□ 0.18
CCL20P78556 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.17■□□□□ 0.18
CCL20P78556 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CCL20P78556 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL20P78556 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCL20P78556 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.17■□□□□ 0.18
CCL20P78556 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.16■□□□□ 0.18
CCL20P78556 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.16■□□□□ 0.18
CCL20P78556 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.16■□□□□ 0.18
CCL20P78556 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL20P78556 AL034346.1-201ENST00000568244 1277 ntBASIC16.16■□□□□ 0.18
CCL20P78556 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCL20P78556 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL20P78556 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL20P78556 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCL20P78556 AC005332.8-201ENST00000622750 2735 ntBASIC16.15■□□□□ 0.18
CCL20P78556 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.15■□□□□ 0.18
CCL20P78556 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.15■□□□□ 0.18
CCL20P78556 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL20P78556 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 AL451085.2-201ENST00000605085 799 ntBASIC16.15■□□□□ 0.18
CCL20P78556 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.15■□□□□ 0.18
CCL20P78556 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.15■□□□□ 0.18
CCL20P78556 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.15■□□□□ 0.18
CCL20P78556 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCL20P78556 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCL20P78556 AC093484.2-201ENST00000580996 2166 ntBASIC16.14■□□□□ 0.17
CCL20P78556 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCL20P78556 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.14■□□□□ 0.17
CCL20P78556 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCL20P78556 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCL20P78556 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 BHLHE23-202ENST00000612929 1109 ntBASIC16.14■□□□□ 0.17
CCL20P78556 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCL20P78556 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CCL20P78556 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.14■□□□□ 0.17
CCL20P78556 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCL20P78556 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCL20P78556 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCL20P78556 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL20P78556 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCL20P78556 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL20P78556 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.13■□□□□ 0.17
CCL20P78556 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CCL20P78556 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL20P78556 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.13■□□□□ 0.17
CCL20P78556 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCL20P78556 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL20P78556 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms