Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.56■□□□□ 0.72
GABREP78334 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.56■□□□□ 0.72
GABREP78334 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.56■□□□□ 0.72
GABREP78334 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
GABREP78334 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 AC133561.5-201ENST00000635547 218 ntBASIC19.56■□□□□ 0.72
GABREP78334 AC010542.4-201ENST00000563151 1910 ntBASIC19.56■□□□□ 0.72
GABREP78334 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
GABREP78334 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.55■□□□□ 0.72
GABREP78334 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 AL117328.2-201ENST00000624617 1940 ntBASIC19.55■□□□□ 0.72
GABREP78334 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
GABREP78334 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.55■□□□□ 0.72
GABREP78334 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.55■□□□□ 0.72
GABREP78334 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.55■□□□□ 0.72
GABREP78334 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 MIR4785-201ENST00000585005 73 ntBASIC19.55■□□□□ 0.72
GABREP78334 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.55■□□□□ 0.72
GABREP78334 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.55■□□□□ 0.72
GABREP78334 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
GABREP78334 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.55■□□□□ 0.72
GABREP78334 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
GABREP78334 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GABREP78334 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
GABREP78334 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
GABREP78334 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 AL135905.2-201ENST00000584934 1404 ntBASIC19.54■□□□□ 0.72
GABREP78334 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
GABREP78334 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.54■□□□□ 0.72
GABREP78334 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 AC133681.1-201ENST00000465482 601 ntBASIC19.54■□□□□ 0.72
GABREP78334 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.54■□□□□ 0.72
GABREP78334 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.54■□□□□ 0.72
GABREP78334 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.54■□□□□ 0.72
GABREP78334 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.54■□□□□ 0.72
GABREP78334 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
GABREP78334 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.54■□□□□ 0.72
GABREP78334 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.54■□□□□ 0.72
GABREP78334 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GABREP78334 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABREP78334 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABREP78334 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.53■□□□□ 0.72
GABREP78334 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GABREP78334 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABREP78334 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABREP78334 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABREP78334 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.53■□□□□ 0.72
GABREP78334 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
GABREP78334 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GABREP78334 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.53■□□□□ 0.72
GABREP78334 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.53■□□□□ 0.72
GABREP78334 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABREP78334 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.53■□□□□ 0.72
GABREP78334 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
GABREP78334 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GABREP78334 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GABREP78334 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.52■□□□□ 0.72
GABREP78334 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
GABREP78334 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.52■□□□□ 0.72
GABREP78334 AC116050.2-201ENST00000612102 1779 ntBASIC19.52■□□□□ 0.72
GABREP78334 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
GABREP78334 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.52■□□□□ 0.72
GABREP78334 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GABREP78334 KRASP1-201ENST00000407852 552 ntBASIC19.52■□□□□ 0.72
GABREP78334 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms