Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4XP62701 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.53■□□□□ 0.56
RPS4XP62701 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4XP62701 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4XP62701 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4XP62701 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.53■□□□□ 0.56
RPS4XP62701 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.53■□□□□ 0.56
RPS4XP62701 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.53■□□□□ 0.56
RPS4XP62701 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4XP62701 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.53■□□□□ 0.56
RPS4XP62701 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.53■□□□□ 0.56
RPS4XP62701 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RPS4XP62701 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.53■□□□□ 0.56
RPS4XP62701 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.53■□□□□ 0.56
RPS4XP62701 SLC7A5P2-201ENST00000553010 536 ntBASIC18.53■□□□□ 0.56
RPS4XP62701 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.53■□□□□ 0.56
RPS4XP62701 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RPS4XP62701 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.53■□□□□ 0.56
RPS4XP62701 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4XP62701 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.53■□□□□ 0.56
RPS4XP62701 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.53■□□□□ 0.56
RPS4XP62701 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4XP62701 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RPS4XP62701 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.53■□□□□ 0.56
RPS4XP62701 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.53■□□□□ 0.56
RPS4XP62701 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4XP62701 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RPS4XP62701 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPS4XP62701 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RPS4XP62701 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4XP62701 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4XP62701 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4XP62701 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4XP62701 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4XP62701 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4XP62701 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RPS4XP62701 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4XP62701 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4XP62701 AC006970.2-201ENST00000450065 779 ntBASIC18.52■□□□□ 0.56
RPS4XP62701 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.52■□□□□ 0.56
RPS4XP62701 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.52■□□□□ 0.56
RPS4XP62701 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.52■□□□□ 0.56
RPS4XP62701 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.52■□□□□ 0.56
RPS4XP62701 RAP2CP1-201ENST00000605103 478 ntBASIC18.52■□□□□ 0.56
RPS4XP62701 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RPS4XP62701 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.52■□□□□ 0.56
RPS4XP62701 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPS4XP62701 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.52■□□□□ 0.55
RPS4XP62701 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.52■□□□□ 0.55
RPS4XP62701 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPS4XP62701 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPS4XP62701 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RPS4XP62701 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RPS4XP62701 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.51■□□□□ 0.55
RPS4XP62701 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.51■□□□□ 0.55
RPS4XP62701 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4XP62701 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4XP62701 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4XP62701 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4XP62701 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.51■□□□□ 0.55
RPS4XP62701 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.51■□□□□ 0.55
RPS4XP62701 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4XP62701 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4XP62701 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.51■□□□□ 0.55
RPS4XP62701 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4XP62701 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4XP62701 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
RPS4XP62701 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RPS4XP62701 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4XP62701 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPS4XP62701 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.51■□□□□ 0.55
RPS4XP62701 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4XP62701 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4XP62701 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4XP62701 AL162377.1-201ENST00000618844 1793 ntBASIC18.5■□□□□ 0.55
RPS4XP62701 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4XP62701 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RPS4XP62701 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4XP62701 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4XP62701 SLC7A5P1-201ENST00000568957 537 ntBASIC18.5■□□□□ 0.55
RPS4XP62701 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.5■□□□□ 0.55
RPS4XP62701 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4XP62701 AC243732.1-201ENST00000612648 864 ntBASIC18.5■□□□□ 0.55
RPS4XP62701 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4XP62701 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4XP62701 AC116050.2-201ENST00000612102 1779 ntBASIC18.5■□□□□ 0.55
RPS4XP62701 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPS4XP62701 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.49■□□□□ 0.55
RPS4XP62701 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RPS4XP62701 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 AL121603.2-201ENST00000557373 2117 ntBASIC18.49■□□□□ 0.55
RPS4XP62701 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPS4XP62701 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms