Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CDC42P60953 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDC42P60953 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC42P60953 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC42P60953 AC092720.2-201ENST00000602388 1665 ntBASIC18.71■□□□□ 0.59
CDC42P60953 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC42P60953 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC42P60953 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.71■□□□□ 0.59
CDC42P60953 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.71■□□□□ 0.59
CDC42P60953 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC42P60953 AL512631.2-201ENST00000604634 923 ntBASIC18.71■□□□□ 0.59
CDC42P60953 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDC42P60953 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC42P60953 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDC42P60953 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.71■□□□□ 0.59
CDC42P60953 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC42P60953 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDC42P60953 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
CDC42P60953 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.71■□□□□ 0.58
CDC42P60953 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.7■□□□□ 0.58
CDC42P60953 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.7■□□□□ 0.58
CDC42P60953 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.7■□□□□ 0.58
CDC42P60953 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDC42P60953 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CDC42P60953 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CDC42P60953 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42P60953 AC055733.4-201ENST00000638462 1354 ntBASIC18.69■□□□□ 0.58
CDC42P60953 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDC42P60953 TCF3P1-201ENST00000423021 1937 ntBASIC18.69■□□□□ 0.58
CDC42P60953 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.69■□□□□ 0.58
CDC42P60953 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDC42P60953 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.69■□□□□ 0.58
CDC42P60953 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.69■□□□□ 0.58
CDC42P60953 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDC42P60953 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.69■□□□□ 0.58
CDC42P60953 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.69■□□□□ 0.58
CDC42P60953 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.69■□□□□ 0.58
CDC42P60953 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDC42P60953 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDC42P60953 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDC42P60953 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDC42P60953 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.68■□□□□ 0.58
CDC42P60953 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDC42P60953 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CDC42P60953 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.68■□□□□ 0.58
CDC42P60953 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.68■□□□□ 0.58
CDC42P60953 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.68■□□□□ 0.58
CDC42P60953 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.68■□□□□ 0.58
CDC42P60953 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.68■□□□□ 0.58
CDC42P60953 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
CDC42P60953 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDC42P60953 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDC42P60953 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDC42P60953 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDC42P60953 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDC42P60953 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDC42P60953 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CDC42P60953 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.67■□□□□ 0.58
CDC42P60953 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDC42P60953 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDC42P60953 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.67■□□□□ 0.58
CDC42P60953 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.67■□□□□ 0.58
CDC42P60953 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDC42P60953 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms