Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.32■□□□□ 0.84
CLDN2P57739 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDN2P57739 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 GCSHP5-201ENST00000443090 522 ntBASIC20.32■□□□□ 0.84
CLDN2P57739 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN2P57739 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.32■□□□□ 0.84
CLDN2P57739 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLDN2P57739 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.32■□□□□ 0.84
CLDN2P57739 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.32■□□□□ 0.84
CLDN2P57739 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDN2P57739 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN2P57739 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN2P57739 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN2P57739 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CLDN2P57739 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN2P57739 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN2P57739 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN2P57739 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN2P57739 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN2P57739 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN2P57739 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN2P57739 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN2P57739 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN2P57739 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN2P57739 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.31■□□□□ 0.84
CLDN2P57739 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.31■□□□□ 0.84
CLDN2P57739 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN2P57739 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN2P57739 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN2P57739 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CLDN2P57739 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN2P57739 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN2P57739 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN2P57739 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN2P57739 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN2P57739 AC087633.2-202ENST00000565166 1439 ntBASIC20.3■□□□□ 0.84
CLDN2P57739 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN2P57739 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN2P57739 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CLDN2P57739 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CLDN2P57739 AC142381.4-202ENST00000563973 229 ntBASIC20.3■□□□□ 0.84
CLDN2P57739 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN2P57739 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN2P57739 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN2P57739 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CLDN2P57739 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN2P57739 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN2P57739 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN2P57739 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN2P57739 Z98882.1-201ENST00000622160 2253 ntBASIC20.29■□□□□ 0.84
CLDN2P57739 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN2P57739 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN2P57739 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN2P57739 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN2P57739 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN2P57739 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN2P57739 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.29■□□□□ 0.84
CLDN2P57739 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN2P57739 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN2P57739 UNC93B4-201ENST00000505679 747 ntBASIC20.29■□□□□ 0.84
CLDN2P57739 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN2P57739 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.29■□□□□ 0.84
CLDN2P57739 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN2P57739 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN2P57739 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN2P57739 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN2P57739 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN2P57739 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN2P57739 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN2P57739 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLDN2P57739 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN2P57739 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLDN2P57739 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN2P57739 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN2P57739 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN2P57739 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN2P57739 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN2P57739 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN2P57739 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN2P57739 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN2P57739 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN2P57739 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.28■□□□□ 0.84
CLDN2P57739 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN2P57739 C2orf69P4-201ENST00000565394 541 ntBASIC20.28■□□□□ 0.84
CLDN2P57739 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLDN2P57739 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN2P57739 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CLDN2P57739 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLDN2P57739 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN2P57739 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms