Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLDN20P56880 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLDN20P56880 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLDN20P56880 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN20P56880 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN20P56880 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN20P56880 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN20P56880 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN20P56880 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CLDN20P56880 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CLDN20P56880 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 Z98882.1-201ENST00000622160 2253 ntBASIC18.77■□□□□ 0.6
CLDN20P56880 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN20P56880 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN20P56880 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CLDN20P56880 MIR663A-201ENST00000385250 93 ntBASIC18.77■□□□□ 0.6
CLDN20P56880 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
CLDN20P56880 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN20P56880 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.77■□□□□ 0.6
CLDN20P56880 AC013268.1-206ENST00000638368 961 ntBASIC18.77■□□□□ 0.6
CLDN20P56880 AC112229.1-201ENST00000639295 961 ntBASIC18.77■□□□□ 0.6
CLDN20P56880 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
CLDN20P56880 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN20P56880 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLDN20P56880 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLDN20P56880 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.77■□□□□ 0.59
CLDN20P56880 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN20P56880 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN20P56880 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN20P56880 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN20P56880 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN20P56880 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
CLDN20P56880 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CLDN20P56880 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN20P56880 AC006970.2-201ENST00000450065 779 ntBASIC18.76■□□□□ 0.59
CLDN20P56880 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.76■□□□□ 0.59
CLDN20P56880 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN20P56880 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN20P56880 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN20P56880 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN20P56880 AC005181.1-201ENST00000604782 1256 ntBASIC18.76■□□□□ 0.59
CLDN20P56880 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN20P56880 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN20P56880 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN20P56880 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN20P56880 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN20P56880 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN20P56880 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN20P56880 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN20P56880 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLDN20P56880 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN20P56880 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLDN20P56880 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN20P56880 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN20P56880 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN20P56880 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN20P56880 AC243732.1-201ENST00000612648 864 ntBASIC18.75■□□□□ 0.59
CLDN20P56880 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.75■□□□□ 0.59
CLDN20P56880 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLDN20P56880 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN20P56880 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN20P56880 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN20P56880 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN20P56880 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN20P56880 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN20P56880 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN20P56880 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CLDN20P56880 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN20P56880 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN20P56880 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN20P56880 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN20P56880 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN20P56880 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN20P56880 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN20P56880 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN20P56880 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN20P56880 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN20P56880 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN20P56880 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN20P56880 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLDN20P56880 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CLDN20P56880 AL050303.2-201ENST00000619798 666 ntBASIC18.74■□□□□ 0.59
CLDN20P56880 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN20P56880 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.74■□□□□ 0.59
CLDN20P56880 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CLDN20P56880 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms