Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC055733.4-201ENST00000638462 1354 ntBASIC17.8■□□□□ 0.44
CLDN12P56749 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN12P56749 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN12P56749 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN12P56749 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN12P56749 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN12P56749 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN12P56749 GUSBP5-201ENST00000418136 578 ntBASIC17.8■□□□□ 0.44
CLDN12P56749 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN12P56749 MIR4466-201ENST00000606121 54 ntBASIC17.8■□□□□ 0.44
CLDN12P56749 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN12P56749 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN12P56749 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN12P56749 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN12P56749 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN12P56749 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN12P56749 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN12P56749 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN12P56749 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN12P56749 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN12P56749 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN12P56749 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN12P56749 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CLDN12P56749 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN12P56749 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN12P56749 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN12P56749 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN12P56749 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN12P56749 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.79■□□□□ 0.44
CLDN12P56749 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CLDN12P56749 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN12P56749 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN12P56749 AC116562.4-201ENST00000641316 2276 ntBASIC17.79■□□□□ 0.44
CLDN12P56749 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLDN12P56749 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN12P56749 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 AC011484.1-201ENST00000377652 1995 ntBASIC17.79■□□□□ 0.44
CLDN12P56749 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLDN12P56749 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN12P56749 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN12P56749 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 TCF3P1-201ENST00000423021 1937 ntBASIC17.78■□□□□ 0.44
CLDN12P56749 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN12P56749 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLDN12P56749 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLDN12P56749 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLDN12P56749 AL035685.1-201ENST00000636663 812 ntBASIC17.78■□□□□ 0.44
CLDN12P56749 SMG8-203ENST00000578922 2178 ntBASIC17.78■□□□□ 0.44
CLDN12P56749 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN12P56749 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN12P56749 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CLDN12P56749 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLDN12P56749 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLDN12P56749 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN12P56749 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN12P56749 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN12P56749 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLDN12P56749 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLDN12P56749 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN12P56749 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN12P56749 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN12P56749 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN12P56749 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN12P56749 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN12P56749 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.77■□□□□ 0.44
CLDN12P56749 AC009237.3-201ENST00000393279 1427 ntBASIC17.77■□□□□ 0.44
CLDN12P56749 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN12P56749 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CLDN12P56749 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN12P56749 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN12P56749 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.77■□□□□ 0.43
CLDN12P56749 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CLDN12P56749 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CLDN12P56749 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.76■□□□□ 0.43
CLDN12P56749 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.76■□□□□ 0.43
CLDN12P56749 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CLDN12P56749 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN12P56749 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN12P56749 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms