Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CDH12P55289 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH12P55289 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CDH12P55289 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH12P55289 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CDH12P55289 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH12P55289 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDH12P55289 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH12P55289 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.08■□□□□ 0.65
CDH12P55289 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDH12P55289 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDH12P55289 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH12P55289 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH12P55289 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.08■□□□□ 0.64
CDH12P55289 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.08■□□□□ 0.64
CDH12P55289 EEF1DP3-203ENST00000566025 782 ntBASIC19.08■□□□□ 0.64
CDH12P55289 AC053503.5-201ENST00000601508 636 ntBASIC19.08■□□□□ 0.64
CDH12P55289 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH12P55289 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CDH12P55289 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH12P55289 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH12P55289 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH12P55289 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CDH12P55289 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH12P55289 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH12P55289 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH12P55289 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH12P55289 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CDH12P55289 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH12P55289 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH12P55289 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH12P55289 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH12P55289 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH12P55289 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDH12P55289 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.07■□□□□ 0.64
CDH12P55289 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CDH12P55289 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH12P55289 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH12P55289 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH12P55289 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH12P55289 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH12P55289 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDH12P55289 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH12P55289 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDH12P55289 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH12P55289 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH12P55289 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.06■□□□□ 0.64
CDH12P55289 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH12P55289 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CDH12P55289 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH12P55289 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CDH12P55289 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDH12P55289 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH12P55289 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH12P55289 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH12P55289 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CDH12P55289 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH12P55289 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH12P55289 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH12P55289 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
CDH12P55289 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH12P55289 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH12P55289 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH12P55289 IRS3P-201ENST00000223076 1006 ntBASIC19.05■□□□□ 0.64
CDH12P55289 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH12P55289 AC105265.2-201ENST00000467189 838 ntBASIC19.05■□□□□ 0.64
CDH12P55289 AL162377.1-201ENST00000618844 1793 ntBASIC19.05■□□□□ 0.64
CDH12P55289 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDH12P55289 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CDH12P55289 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH12P55289 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH12P55289 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH12P55289 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH12P55289 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.05■□□□□ 0.64
CDH12P55289 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH12P55289 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH12P55289 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CDH12P55289 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH12P55289 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CDH12P55289 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH12P55289 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH12P55289 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH12P55289 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
CDH12P55289 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH12P55289 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH12P55289 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms