Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN5P54829 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN5P54829 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PTPN5P54829 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN5P54829 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.24■□□□□ 0.99
PTPN5P54829 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.24■□□□□ 0.99
PTPN5P54829 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN5P54829 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN5P54829 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN5P54829 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN5P54829 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN5P54829 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN5P54829 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN5P54829 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.23■□□□□ 0.99
PTPN5P54829 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PTPN5P54829 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN5P54829 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN5P54829 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN5P54829 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN5P54829 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN5P54829 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.23■□□□□ 0.99
PTPN5P54829 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN5P54829 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.22■□□□□ 0.99
PTPN5P54829 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN5P54829 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PTPN5P54829 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.22■□□□□ 0.99
PTPN5P54829 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN5P54829 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN5P54829 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.22■□□□□ 0.99
PTPN5P54829 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.22■□□□□ 0.99
PTPN5P54829 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.22■□□□□ 0.99
PTPN5P54829 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.22■□□□□ 0.99
PTPN5P54829 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.22■□□□□ 0.99
PTPN5P54829 AC008175.2-201ENST00000612840 297 ntBASIC21.22■□□□□ 0.99
PTPN5P54829 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PTPN5P54829 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN5P54829 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN5P54829 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN5P54829 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PTPN5P54829 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN5P54829 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PTPN5P54829 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.21■□□□□ 0.99
PTPN5P54829 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PTPN5P54829 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.21■□□□□ 0.99
PTPN5P54829 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.21■□□□□ 0.99
PTPN5P54829 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 AL355075.4-201ENST00000554988 638 ntBASIC21.21■□□□□ 0.99
PTPN5P54829 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.21■□□□□ 0.99
PTPN5P54829 SOX15-203ENST00000570788 1093 ntBASIC21.21■□□□□ 0.99
PTPN5P54829 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.21■□□□□ 0.99
PTPN5P54829 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.21■□□□□ 0.99
PTPN5P54829 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.21■□□□□ 0.99
PTPN5P54829 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN5P54829 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.21■□□□□ 0.99
PTPN5P54829 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
PTPN5P54829 AC003102.1-202ENST00000563394 1796 ntBASIC21.2■□□□□ 0.99
PTPN5P54829 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 KRT17P1-201ENST00000399211 1546 ntBASIC21.2■□□□□ 0.98
PTPN5P54829 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.2■□□□□ 0.98
PTPN5P54829 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
PTPN5P54829 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.2■□□□□ 0.98
PTPN5P54829 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PTPN5P54829 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN5P54829 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPN5P54829 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PTPN5P54829 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN5P54829 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN5P54829 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN5P54829 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPN5P54829 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN5P54829 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN5P54829 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.19■□□□□ 0.98
PTPN5P54829 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.19■□□□□ 0.98
PTPN5P54829 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.19■□□□□ 0.98
PTPN5P54829 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms