Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
RNF144AP50876 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF144AP50876 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF144AP50876 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF144AP50876 FP700111.2-201ENST00000619190 1892 ntBASIC19.04■□□□□ 0.64
RNF144AP50876 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
RNF144AP50876 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF144AP50876 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF144AP50876 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144AP50876 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF144AP50876 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144AP50876 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RNF144AP50876 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF144AP50876 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144AP50876 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144AP50876 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144AP50876 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF144AP50876 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144AP50876 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF144AP50876 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144AP50876 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF144AP50876 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF144AP50876 MIR5787-201ENST00000611784 55 ntBASIC19.03■□□□□ 0.64
RNF144AP50876 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144AP50876 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144AP50876 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144AP50876 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144AP50876 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144AP50876 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF144AP50876 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144AP50876 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144AP50876 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144AP50876 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144AP50876 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
RNF144AP50876 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144AP50876 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144AP50876 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144AP50876 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF144AP50876 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144AP50876 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF144AP50876 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.02■□□□□ 0.64
RNF144AP50876 AL121603.2-201ENST00000557373 2117 ntBASIC19.02■□□□□ 0.64
RNF144AP50876 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF144AP50876 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144AP50876 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RNF144AP50876 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144AP50876 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF144AP50876 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF144AP50876 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.02■□□□□ 0.63
RNF144AP50876 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RNF144AP50876 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
RNF144AP50876 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144AP50876 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF144AP50876 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144AP50876 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144AP50876 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF144AP50876 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144AP50876 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144AP50876 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF144AP50876 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.01■□□□□ 0.63
RNF144AP50876 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF144AP50876 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF144AP50876 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.01■□□□□ 0.63
RNF144AP50876 AC011767.1-201ENST00000617410 1153 ntBASIC19.01■□□□□ 0.63
RNF144AP50876 MYCNOS-205ENST00000641950 531 ntBASIC19.01■□□□□ 0.63
RNF144AP50876 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144AP50876 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF144AP50876 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF144AP50876 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144AP50876 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144AP50876 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144AP50876 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF144AP50876 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144AP50876 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144AP50876 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF144AP50876 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144AP50876 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19■□□□□ 0.63
RNF144AP50876 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19■□□□□ 0.63
RNF144AP50876 AC073314.1-201ENST00000568729 2216 ntBASIC19■□□□□ 0.63
RNF144AP50876 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19■□□□□ 0.63
RNF144AP50876 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144AP50876 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144AP50876 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19■□□□□ 0.63
RNF144AP50876 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19■□□□□ 0.63
RNF144AP50876 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19■□□□□ 0.63
RNF144AP50876 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19■□□□□ 0.63
RNF144AP50876 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
RNF144AP50876 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19■□□□□ 0.63
RNF144AP50876 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144AP50876 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19■□□□□ 0.63
RNF144AP50876 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19■□□□□ 0.63
RNF144AP50876 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19■□□□□ 0.63
RNF144AP50876 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144AP50876 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144AP50876 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF144AP50876 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144AP50876 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF144AP50876 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144AP50876 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144AP50876 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms