Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCP4P48539 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC14.27□□□□□ -0.12
PCP4P48539 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.27□□□□□ -0.12
PCP4P48539 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
PCP4P48539 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCP4P48539 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.27□□□□□ -0.12
PCP4P48539 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PCP4P48539 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCP4P48539 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCP4P48539 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCP4P48539 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PCP4P48539 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCP4P48539 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.27□□□□□ -0.13
PCP4P48539 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCP4P48539 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCP4P48539 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCP4P48539 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.27□□□□□ -0.13
PCP4P48539 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCP4P48539 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PCP4P48539 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCP4P48539 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PCP4P48539 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCP4P48539 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCP4P48539 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PCP4P48539 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.26□□□□□ -0.13
PCP4P48539 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
PCP4P48539 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.26□□□□□ -0.13
PCP4P48539 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.26□□□□□ -0.13
PCP4P48539 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PCP4P48539 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PCP4P48539 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
PCP4P48539 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCP4P48539 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
PCP4P48539 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCP4P48539 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.25□□□□□ -0.13
PCP4P48539 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.25□□□□□ -0.13
PCP4P48539 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PCP4P48539 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PCP4P48539 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.24□□□□□ -0.13
PCP4P48539 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PCP4P48539 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
PCP4P48539 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.24□□□□□ -0.13
PCP4P48539 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCP4P48539 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.24□□□□□ -0.13
PCP4P48539 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PCP4P48539 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PCP4P48539 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PCP4P48539 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PCP4P48539 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.24□□□□□ -0.13
PCP4P48539 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PCP4P48539 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.24□□□□□ -0.13
PCP4P48539 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PCP4P48539 OR6D1P-202ENST00000641007 5290 ntBASIC14.24□□□□□ -0.13
PCP4P48539 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms