Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 HRT3YLR097C 1035 nt0.95□□□□□ -2.26
VPS55P47111 YLR311CYLR311C 348 nt0.95□□□□□ -2.26
VPS55P47111 MFA1YDR461W 111 nt0.94□□□□□ -2.26
VPS55P47111 RTT102YGR275W 474 nt0.94□□□□□ -2.26
VPS55P47111 SUI2YJR007W 915 nt0.94□□□□□ -2.26
VPS55P47111 RAD10YML095C 633 nt0.94□□□□□ -2.26
VPS55P47111 YSY6YBR162W-A 198 nt0.94□□□□□ -2.26
VPS55P47111 YIL166CYIL166C 1629 nt0.93□□□□□ -2.26
VPS55P47111 YDL026WYDL026W 312 nt0.93□□□□□ -2.26
VPS55P47111 CTK2YJL006C 972 nt0.93□□□□□ -2.26
VPS55P47111 YLR140WYLR140W 327 nt0.93□□□□□ -2.26
VPS55P47111 MTG1YMR097C 1104 nt0.93□□□□□ -2.26
VPS55P47111 MRPL40YPL173W 894 nt0.93□□□□□ -2.26
VPS55P47111 GCD2YGR083C 1956 nt0.93□□□□□ -2.26
VPS55P47111 PAF1YBR279W 1338 nt0.92□□□□□ -2.26
VPS55P47111 SIP4YJL089W 2490 nt0.92□□□□□ -2.26
VPS55P47111 SRB4YER022W 2064 nt0.92□□□□□ -2.26
VPS55P47111 CTF13YMR094W 1437 nt0.92□□□□□ -2.26
VPS55P47111 BTT1YDR252W 450 nt0.92□□□□□ -2.26
VPS55P47111 YGL118CYGL118C 438 nt0.92□□□□□ -2.26
VPS55P47111 YHR182C-AYHR182C-A 474 nt0.92□□□□□ -2.26
VPS55P47111 YJR023CYJR023C 402 nt0.92□□□□□ -2.26
VPS55P47111 DYN3YMR299C 939 nt0.92□□□□□ -2.26
VPS55P47111 GAL7YBR018C 1101 nt0.92□□□□□ -2.26
VPS55P47111 SRL4YPL033C 846 nt0.92□□□□□ -2.26
VPS55P47111 YPR074W-AYPR074W-A 171 nt0.92□□□□□ -2.26
VPS55P47111 TUS1YLR425W 3924 nt0.92□□□□□ -2.26
VPS55P47111 SMC4YLR086W 4257 nt0.92□□□□□ -2.26
VPS55P47111 PIP2YOR363C 2991 nt0.91□□□□□ -2.26
VPS55P47111 ATP16YDL004W 483 nt0.91□□□□□ -2.26
VPS55P47111 RPL35BYDL136W 363 nt0.91□□□□□ -2.26
VPS55P47111 PLP1YDR183W 693 nt0.91□□□□□ -2.26
VPS55P47111 RMD5YDR255C 1266 nt0.91□□□□□ -2.26
VPS55P47111 YFR054CYFR054C 579 nt0.91□□□□□ -2.26
VPS55P47111 HOP2YGL033W 657 nt0.91□□□□□ -2.26
VPS55P47111 YGR204C-AYGR204C-A 114 nt0.91□□□□□ -2.26
VPS55P47111 SNC1YAL030W 354 nt0.91□□□□□ -2.26
VPS55P47111 YPR147CYPR147C 915 nt0.91□□□□□ -2.26
VPS55P47111 RPH1YER169W 2391 nt0.91□□□□□ -2.26
VPS55P47111 ASI3YNL008C 2031 nt0.91□□□□□ -2.26
VPS55P47111 YDR170W-AYDR170W-A 1323 nt0.9□□□□□ -2.26
VPS55P47111 TRM732YMR259C 4263 nt0.9□□□□□ -2.26
VPS55P47111 BFR1YOR198C 1413 nt0.9□□□□□ -2.26
VPS55P47111 YIL082WYIL082W 873 nt0.9□□□□□ -2.27
VPS55P47111 RXT2YBR095C 1293 nt0.9□□□□□ -2.27
VPS55P47111 ADR1YDR216W 3972 nt0.9□□□□□ -2.27
VPS55P47111 RSM22YKL155C 1887 nt0.9□□□□□ -2.27
VPS55P47111 MDM36YPR083W 1740 nt0.89□□□□□ -2.27
VPS55P47111 SPT7YBR081C 3999 nt0.89□□□□□ -2.27
VPS55P47111 SST2YLR452C 2097 nt0.89□□□□□ -2.27
VPS55P47111 YDR336WYDR336W 945 nt0.89□□□□□ -2.27
VPS55P47111 YIL141WYIL141W 390 nt0.89□□□□□ -2.27
VPS55P47111 EGD1YPL037C 474 nt0.89□□□□□ -2.27
VPS55P47111 TTI1YKL033W 3117 nt0.89□□□□□ -2.27
VPS55P47111 PLC1YPL268W 2610 nt0.89□□□□□ -2.27
VPS55P47111 APL1YJR005W 2103 nt0.88□□□□□ -2.27
VPS55P47111 YCR015CYCR015C 954 nt0.88□□□□□ -2.27
VPS55P47111 YGL165CYGL165C 579 nt0.88□□□□□ -2.27
VPS55P47111 GRE2YOL151W 1029 nt0.88□□□□□ -2.27
VPS55P47111 PTC5YOR090C 1719 nt0.88□□□□□ -2.27
VPS55P47111 CDC53YDL132W 2448 nt0.88□□□□□ -2.27
VPS55P47111 MDS3YGL197W 4464 nt0.88□□□□□ -2.27
VPS55P47111 NAN1YPL126W 2691 nt0.88□□□□□ -2.27
VPS55P47111 AI4Q0065 1671 nt0.88□□□□□ -2.27
VPS55P47111 HSE1YHL002W 1359 nt0.87□□□□□ -2.27
VPS55P47111 SEC63YOR254C 1992 nt0.87□□□□□ -2.27
VPS55P47111 MAK10YEL053C 2202 nt0.87□□□□□ -2.27
VPS55P47111 YDR124WYDR124W 975 nt0.87□□□□□ -2.27
VPS55P47111 KEI1YDR367W 666 nt0.87□□□□□ -2.27
VPS55P47111 YMR147WYMR147W 672 nt0.87□□□□□ -2.27
VPS55P47111 MER1YNL210W 813 nt0.87□□□□□ -2.27
VPS55P47111 PEX15YOL044W 1152 nt0.87□□□□□ -2.27
VPS55P47111 ATX2YOR079C 942 nt0.87□□□□□ -2.27
VPS55P47111 BST1YFL025C 3090 nt0.87□□□□□ -2.27
VPS55P47111 MNL2YLR057W 2550 nt0.87□□□□□ -2.27
VPS55P47111 GRR1YJR090C 3456 nt0.86□□□□□ -2.27
VPS55P47111 CDC50YCR094W 1176 nt0.86□□□□□ -2.27
VPS55P47111 YDL062WYDL062W 426 nt0.86□□□□□ -2.27
VPS55P47111 AIM6YDL237W 1173 nt0.86□□□□□ -2.27
VPS55P47111 SNO3YFL060C 669 nt0.86□□□□□ -2.27
VPS55P47111 MFA2YNL145W 117 nt0.86□□□□□ -2.27
VPS55P47111 HCH1YNL281W 462 nt0.86□□□□□ -2.27
VPS55P47111 SNO2YNL334C 669 nt0.86□□□□□ -2.27
VPS55P47111 NTC20YBR188C 423 nt0.86□□□□□ -2.27
VPS55P47111 FYV4YHR059W 393 nt0.85□□□□□ -2.27
VPS55P47111 YHR214W-AYHR214W-A 486 nt0.85□□□□□ -2.27
VPS55P47111 YAR068WYAR068W 486 nt0.85□□□□□ -2.27
VPS55P47111 YLR307C-AYLR307C-A 264 nt0.85□□□□□ -2.27
VPS55P47111 CTR9YOL145C 3234 nt0.85□□□□□ -2.27
VPS55P47111 YOL162WYOL162W 648 nt0.85□□□□□ -2.27
VPS55P47111 YCL001W-AYCL001W-A 462 nt0.85□□□□□ -2.27
VPS55P47111 TRZ1YKR079C 2517 nt0.85□□□□□ -2.27
VPS55P47111 ASG1YIL130W 2895 nt0.85□□□□□ -2.27
VPS55P47111 HIR3YJR140C 4947 nt0.85□□□□□ -2.27
VPS55P47111 VAM6YDL077C 3150 nt0.84□□□□□ -2.27
VPS55P47111 RIC1YLR039C 3171 nt0.84□□□□□ -2.27
VPS55P47111 STB4YMR019W 2850 nt0.84□□□□□ -2.27
VPS55P47111 SPE1YKL184W 1401 nt0.84□□□□□ -2.27
VPS55P47111 YDR381C-AYDR381C-A 345 nt0.84□□□□□ -2.27
VPS55P47111 YFR056CYFR056C 369 nt0.84□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms