Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATRXP46100 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.92■□□□□ 0.62
ATRXP46100 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.92■□□□□ 0.62
ATRXP46100 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.92■□□□□ 0.62
ATRXP46100 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATRXP46100 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATRXP46100 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATRXP46100 AL031133.1-201ENST00000406807 723 ntBASIC18.92■□□□□ 0.62
ATRXP46100 AK4P3-201ENST00000418260 669 ntBASIC18.92■□□□□ 0.62
ATRXP46100 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATRXP46100 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.92■□□□□ 0.62
ATRXP46100 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.92■□□□□ 0.62
ATRXP46100 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.92■□□□□ 0.62
ATRXP46100 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
ATRXP46100 AC137767.1-201ENST00000602918 1920 ntBASIC18.91■□□□□ 0.62
ATRXP46100 ANOS2P-203ENST00000472227 1816 ntBASIC18.91■□□□□ 0.62
ATRXP46100 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATRXP46100 AC027702.1-201ENST00000563810 1770 ntBASIC18.91■□□□□ 0.62
ATRXP46100 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
ATRXP46100 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATRXP46100 KRASP1-201ENST00000407852 552 ntBASIC18.91■□□□□ 0.62
ATRXP46100 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.91■□□□□ 0.62
ATRXP46100 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.91■□□□□ 0.62
ATRXP46100 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.91■□□□□ 0.62
ATRXP46100 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ATRXP46100 LINC01238-205ENST00000567549 1107 ntBASIC18.91■□□□□ 0.62
ATRXP46100 AC006011.2-201ENST00000621313 1158 ntBASIC18.91■□□□□ 0.62
ATRXP46100 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATRXP46100 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATRXP46100 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ATRXP46100 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATRXP46100 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ATRXP46100 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.91■□□□□ 0.62
ATRXP46100 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ATRXP46100 HMGN1P19-201ENST00000436976 333 ntBASIC18.91■□□□□ 0.62
ATRXP46100 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.91■□□□□ 0.62
ATRXP46100 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.91■□□□□ 0.62
ATRXP46100 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.9■□□□□ 0.62
ATRXP46100 AC020928.2-201ENST00000588717 2197 ntBASIC18.9■□□□□ 0.62
ATRXP46100 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
ATRXP46100 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.9■□□□□ 0.62
ATRXP46100 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
ATRXP46100 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ATRXP46100 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATRXP46100 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.9■□□□□ 0.62
ATRXP46100 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.9■□□□□ 0.62
ATRXP46100 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATRXP46100 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATRXP46100 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.9■□□□□ 0.62
ATRXP46100 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ATRXP46100 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATRXP46100 AC091799.1-201ENST00000422823 811 ntBASIC18.9■□□□□ 0.62
ATRXP46100 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.9■□□□□ 0.62
ATRXP46100 CR769767.2-201ENST00000622735 460 ntBASIC18.9■□□□□ 0.62
ATRXP46100 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATRXP46100 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.89■□□□□ 0.62
ATRXP46100 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.89■□□□□ 0.61
ATRXP46100 RBM17P1-201ENST00000453646 1190 ntBASIC18.89■□□□□ 0.61
ATRXP46100 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATRXP46100 AC022616.7-201ENST00000525383 220 ntBASIC18.89■□□□□ 0.61
ATRXP46100 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.89■□□□□ 0.61
ATRXP46100 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATRXP46100 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATRXP46100 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATRXP46100 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATRXP46100 AC063952.2-201ENST00000498792 1227 ntBASIC18.89■□□□□ 0.61
ATRXP46100 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.89■□□□□ 0.61
ATRXP46100 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
ATRXP46100 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ATRXP46100 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.89■□□□□ 0.61
ATRXP46100 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.88■□□□□ 0.61
ATRXP46100 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATRXP46100 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATRXP46100 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATRXP46100 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.88■□□□□ 0.61
ATRXP46100 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.88■□□□□ 0.61
ATRXP46100 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.88■□□□□ 0.61
ATRXP46100 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.88■□□□□ 0.61
ATRXP46100 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.88■□□□□ 0.61
ATRXP46100 AC110285.5-201ENST00000611501 352 ntBASIC18.88■□□□□ 0.61
ATRXP46100 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.88■□□□□ 0.61
ATRXP46100 AC010947.1-201ENST00000623454 693 ntBASIC18.88■□□□□ 0.61
ATRXP46100 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATRXP46100 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATRXP46100 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
ATRXP46100 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATRXP46100 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.88■□□□□ 0.61
ATRXP46100 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATRXP46100 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.88■□□□□ 0.61
ATRXP46100 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATRXP46100 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.87■□□□□ 0.61
ATRXP46100 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATRXP46100 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATRXP46100 CYP2D8P-201ENST00000433633 1490 ntBASIC18.87■□□□□ 0.61
ATRXP46100 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATRXP46100 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
ATRXP46100 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATRXP46100 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATRXP46100 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATRXP46100 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms