Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 YKR075W-AYKR075W-A 270 nt1.89□□□□□ -2.11
RTR1P40084 FYV6YNL133C 522 nt1.89□□□□□ -2.11
RTR1P40084 YBR013CYBR013C 390 nt1.89□□□□□ -2.11
RTR1P40084 YPR147CYPR147C 915 nt1.89□□□□□ -2.11
RTR1P40084 APA1YCL050C 966 nt1.89□□□□□ -2.11
RTR1P40084 MES1YGR264C 2256 nt1.89□□□□□ -2.11
RTR1P40084 CDC60YPL160W 3273 nt1.89□□□□□ -2.11
RTR1P40084 REV1YOR346W 2958 nt1.88□□□□□ -2.11
RTR1P40084 ATG38YLR211C 681 nt1.88□□□□□ -2.11
RTR1P40084 HUG1YML058W-A 207 nt1.88□□□□□ -2.11
RTR1P40084 ARR2YPR200C 393 nt1.88□□□□□ -2.11
RTR1P40084 MEC1YBR136W 7107 nt1.88□□□□□ -2.11
RTR1P40084 CFT2YLR115W 2580 nt1.88□□□□□ -2.11
RTR1P40084 YFR056CYFR056C 369 nt1.87□□□□□ -2.11
RTR1P40084 YML084WYML084W 309 nt1.87□□□□□ -2.11
RTR1P40084 GIM3YNL153C 390 nt1.87□□□□□ -2.11
RTR1P40084 UTP21YLR409C 2820 nt1.87□□□□□ -2.11
RTR1P40084 LRE1YCL051W 1752 nt1.87□□□□□ -2.11
RTR1P40084 TDA9YML081W 3756 nt1.86□□□□□ -2.11
RTR1P40084 COX13YGL191W 390 nt1.86□□□□□ -2.11
RTR1P40084 NEJ1YLR265C 1029 nt1.86□□□□□ -2.11
RTR1P40084 MIX23YBL107C 591 nt1.86□□□□□ -2.11
RTR1P40084 YBR090CYBR090C 369 nt1.86□□□□□ -2.11
RTR1P40084 GNT1YOR320C 1476 nt1.86□□□□□ -2.11
RTR1P40084 YBP1YBR216C 2025 nt1.86□□□□□ -2.11
RTR1P40084 HSL1YKL101W 4557 nt1.85□□□□□ -2.11
RTR1P40084 GRE2YOL151W 1029 nt1.85□□□□□ -2.11
RTR1P40084 SPC72YAL047C 1869 nt1.85□□□□□ -2.11
RTR1P40084 DFG16YOR030W 1860 nt1.85□□□□□ -2.11
RTR1P40084 HCS1YKL017C 2052 nt1.85□□□□□ -2.11
RTR1P40084 VPS15YBR097W 4365 nt1.85□□□□□ -2.11
RTR1P40084 YDL163WYDL163W 303 nt1.84□□□□□ -2.11
RTR1P40084 SHE2YKL130C 741 nt1.84□□□□□ -2.11
RTR1P40084 HRI1YLR301W 735 nt1.84□□□□□ -2.11
RTR1P40084 BAG7YOR134W 1230 nt1.84□□□□□ -2.11
RTR1P40084 TOA1YOR194C 861 nt1.84□□□□□ -2.11
RTR1P40084 ATP16YDL004W 483 nt1.83□□□□□ -2.12
RTR1P40084 YDR018CYDR018C 1191 nt1.83□□□□□ -2.12
RTR1P40084 FMP16YDR070C 282 nt1.83□□□□□ -2.12
RTR1P40084 YGL242CYGL242C 546 nt1.83□□□□□ -2.12
RTR1P40084 TPM2YIL138C 486 nt1.83□□□□□ -2.12
RTR1P40084 YOR333CYOR333C 417 nt1.83□□□□□ -2.12
RTR1P40084 MNE1YOR350C 1992 nt1.83□□□□□ -2.12
RTR1P40084 AGC1YPR021C 2709 nt1.82□□□□□ -2.12
RTR1P40084 YGL069CYGL069C 465 nt1.82□□□□□ -2.12
RTR1P40084 SUI2YJR007W 915 nt1.82□□□□□ -2.12
RTR1P40084 SFM1YOR021C 642 nt1.82□□□□□ -2.12
RTR1P40084 AME1YBR211C 975 nt1.82□□□□□ -2.12
RTR1P40084 snR44snR44 211 nt1.82□□□□□ -2.12
RTR1P40084 SXM1YDR395W 2835 nt1.81□□□□□ -2.12
RTR1P40084 CDC53YDL132W 2448 nt1.81□□□□□ -2.12
RTR1P40084 RAV2YDR202C 1056 nt1.81□□□□□ -2.12
RTR1P40084 MIC19YFR011C 513 nt1.81□□□□□ -2.12
RTR1P40084 SEC28YIL076W 891 nt1.81□□□□□ -2.12
RTR1P40084 CIN2YPL241C 807 nt1.81□□□□□ -2.12
RTR1P40084 RNH70YGR276C 1662 nt1.8□□□□□ -2.12
RTR1P40084 ECM25YJL201W 1800 nt1.8□□□□□ -2.12
RTR1P40084 NSE4YDL105W 1209 nt1.8□□□□□ -2.12
RTR1P40084 YDR262WYDR262W 819 nt1.8□□□□□ -2.12
RTR1P40084 RPL37BYDR500C 267 nt1.8□□□□□ -2.12
RTR1P40084 PRP38YGR075C 729 nt1.8□□□□□ -2.12
RTR1P40084 YHR022CYHR022C 771 nt1.8□□□□□ -2.12
RTR1P40084 ATX2YOR079C 942 nt1.8□□□□□ -2.12
RTR1P40084 YBR287WYBR287W 1284 nt1.8□□□□□ -2.12
RTR1P40084 UBP11YKR098C 2154 nt1.79□□□□□ -2.12
RTR1P40084 ARG3YJL088W 1017 nt1.79□□□□□ -2.12
RTR1P40084 YLR053CYLR053C 327 nt1.79□□□□□ -2.12
RTR1P40084 PDP3YLR455W 915 nt1.79□□□□□ -2.12
RTR1P40084 IPI3YNL182C 1668 nt1.79□□□□□ -2.12
RTR1P40084 YNL144CYNL144C 2223 nt1.79□□□□□ -2.12
RTR1P40084 MDM20YOL076W 2391 nt1.79□□□□□ -2.12
RTR1P40084 YDR341CYDR341C 1824 nt1.78□□□□□ -2.12
RTR1P40084 ECM5YMR176W 4236 nt1.78□□□□□ -2.12
RTR1P40084 UTP6YDR449C 1323 nt1.78□□□□□ -2.12
RTR1P40084 MSL1YIR009W 336 nt1.78□□□□□ -2.12
RTR1P40084 YOR366WYOR366W 354 nt1.78□□□□□ -2.12
RTR1P40084 PET20YPL159C 762 nt1.78□□□□□ -2.12
RTR1P40084 CUP9YPL177C 921 nt1.78□□□□□ -2.12
RTR1P40084 YBR062CYBR062C 543 nt1.78□□□□□ -2.12
RTR1P40084 CDC24YAL041W 2565 nt1.78□□□□□ -2.12
RTR1P40084 GRR1YJR090C 3456 nt1.78□□□□□ -2.13
RTR1P40084 ASG1YIL130W 2895 nt1.77□□□□□ -2.13
RTR1P40084 SYH1YPL105C 2550 nt1.77□□□□□ -2.13
RTR1P40084 CTF13YMR094W 1437 nt1.77□□□□□ -2.13
RTR1P40084 CDC50YCR094W 1176 nt1.77□□□□□ -2.13
RTR1P40084 YGL204CYGL204C 306 nt1.77□□□□□ -2.13
RTR1P40084 YLR412C-AYLR412C-A 207 nt1.77□□□□□ -2.13
RTR1P40084 URA5YML106W 681 nt1.77□□□□□ -2.13
RTR1P40084 SEN15YMR059W 387 nt1.77□□□□□ -2.13
RTR1P40084 YOL085W-AYOL085W-A 213 nt1.77□□□□□ -2.13
RTR1P40084 UFE1YOR075W 1041 nt1.77□□□□□ -2.13
RTR1P40084 RPN8YOR261C 1017 nt1.77□□□□□ -2.13
RTR1P40084 VID24YBR105C 1089 nt1.77□□□□□ -2.13
RTR1P40084 ADF1YCL058W-A 342 nt1.77□□□□□ -2.13
RTR1P40084 LEU3YLR451W 2661 nt1.77□□□□□ -2.13
RTR1P40084 LAA1YJL207C 6045 nt1.77□□□□□ -2.13
RTR1P40084 PTC5YOR090C 1719 nt1.77□□□□□ -2.13
RTR1P40084 SOK2YMR016C 2358 nt1.77□□□□□ -2.13
RTR1P40084 PET309YLR067C 2898 nt1.76□□□□□ -2.13
RTR1P40084 SNC1YAL030W 354 nt1.76□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 8.4 ms