Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
HMGCLP35914 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.46■□□□□ 0.87
HMGCLP35914 PKD1P6-201ENST00000343738 4769 ntBASIC20.46■□□□□ 0.87
HMGCLP35914 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLP35914 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLP35914 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.87
HMGCLP35914 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.45■□□□□ 0.87
HMGCLP35914 FP700111.2-201ENST00000619190 1892 ntBASIC20.45■□□□□ 0.86
HMGCLP35914 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLP35914 AC010980.2-201ENST00000587099 1412 ntBASIC20.45■□□□□ 0.86
HMGCLP35914 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLP35914 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HMGCLP35914 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLP35914 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLP35914 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLP35914 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.45■□□□□ 0.86
HMGCLP35914 MCRIP2P1-201ENST00000394346 511 ntBASIC20.45■□□□□ 0.86
HMGCLP35914 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.45■□□□□ 0.86
HMGCLP35914 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLP35914 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGCLP35914 AC090192.1-201ENST00000517740 490 ntBASIC20.45■□□□□ 0.86
HMGCLP35914 AF201337.1-201ENST00000520239 748 ntBASIC20.45■□□□□ 0.86
HMGCLP35914 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.45■□□□□ 0.86
HMGCLP35914 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.45■□□□□ 0.86
HMGCLP35914 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
HMGCLP35914 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.45■□□□□ 0.86
HMGCLP35914 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLP35914 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HMGCLP35914 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.44■□□□□ 0.86
HMGCLP35914 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLP35914 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLP35914 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGCLP35914 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLP35914 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGCLP35914 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLP35914 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLP35914 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLP35914 NCF1B-203ENST00000435988 1254 ntBASIC20.44■□□□□ 0.86
HMGCLP35914 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.44■□□□□ 0.86
HMGCLP35914 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.44■□□□□ 0.86
HMGCLP35914 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLP35914 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLP35914 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
HMGCLP35914 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLP35914 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGCLP35914 AC087633.2-202ENST00000565166 1439 ntBASIC20.44■□□□□ 0.86
HMGCLP35914 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.44■□□□□ 0.86
HMGCLP35914 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.44■□□□□ 0.86
HMGCLP35914 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGCLP35914 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGCLP35914 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLP35914 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGCLP35914 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLP35914 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HMGCLP35914 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGCLP35914 PGM5P4-201ENST00000421970 445 ntBASIC20.43■□□□□ 0.86
HMGCLP35914 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLP35914 AC093787.1-201ENST00000450396 207 ntBASIC20.43■□□□□ 0.86
HMGCLP35914 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGCLP35914 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLP35914 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLP35914 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HMGCLP35914 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCLP35914 AL121603.2-201ENST00000557373 2117 ntBASIC20.42■□□□□ 0.86
HMGCLP35914 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCLP35914 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCLP35914 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCLP35914 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCLP35914 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGCLP35914 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCLP35914 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCLP35914 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGCLP35914 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.42■□□□□ 0.86
HMGCLP35914 AC105036.2-201ENST00000569468 176 ntBASIC20.42■□□□□ 0.86
HMGCLP35914 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGCLP35914 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.42■□□□□ 0.86
HMGCLP35914 AL121832.2-201ENST00000610979 668 ntBASIC20.42■□□□□ 0.86
HMGCLP35914 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCLP35914 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCLP35914 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGCLP35914 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCLP35914 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HMGCLP35914 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGCLP35914 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGCLP35914 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HMGCLP35914 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGCLP35914 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCLP35914 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.41■□□□□ 0.86
HMGCLP35914 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.41■□□□□ 0.86
HMGCLP35914 AC083906.2-201ENST00000511578 360 ntBASIC20.41■□□□□ 0.86
HMGCLP35914 CYP2T3P-201ENST00000601990 817 ntBASIC20.41■□□□□ 0.86
HMGCLP35914 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGCLP35914 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms