Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC1P35052 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC1P35052 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC1P35052 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC1P35052 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
GPC1P35052 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.43■□□□□ 0.7
GPC1P35052 KRT18P20-201ENST00000548986 1279 ntBASIC19.43■□□□□ 0.7
GPC1P35052 RARRES2P11-201ENST00000635158 484 ntBASIC19.43■□□□□ 0.7
GPC1P35052 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC1P35052 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GPC1P35052 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
GPC1P35052 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC1P35052 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC1P35052 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC1P35052 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC1P35052 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC1P35052 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC1P35052 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC1P35052 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.42■□□□□ 0.7
GPC1P35052 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC1P35052 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC1P35052 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC1P35052 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GPC1P35052 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC1P35052 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GPC1P35052 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.42■□□□□ 0.7
GPC1P35052 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.42■□□□□ 0.7
GPC1P35052 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
GPC1P35052 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC1P35052 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC1P35052 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC1P35052 FEM1AP1-201ENST00000431297 1995 ntBASIC19.41■□□□□ 0.7
GPC1P35052 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC1P35052 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC1P35052 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC1P35052 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.41■□□□□ 0.7
GPC1P35052 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC1P35052 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.41■□□□□ 0.7
GPC1P35052 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.41■□□□□ 0.7
GPC1P35052 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC1P35052 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC1P35052 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GPC1P35052 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC1P35052 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GPC1P35052 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
GPC1P35052 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.4■□□□□ 0.7
GPC1P35052 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC1P35052 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.4■□□□□ 0.7
GPC1P35052 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC1P35052 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC1P35052 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.4■□□□□ 0.7
GPC1P35052 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC1P35052 FP700111.2-201ENST00000619190 1892 ntBASIC19.4■□□□□ 0.7
GPC1P35052 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC1P35052 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
GPC1P35052 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.4■□□□□ 0.7
GPC1P35052 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GPC1P35052 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC1P35052 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC1P35052 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC1P35052 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC1P35052 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.4■□□□□ 0.7
GPC1P35052 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GPC1P35052 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GPC1P35052 AC007225.1-201ENST00000566331 1836 ntBASIC19.39■□□□□ 0.7
GPC1P35052 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GPC1P35052 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
GPC1P35052 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GPC1P35052 LINC01006-201ENST00000333319 2292 ntBASIC19.39■□□□□ 0.69
GPC1P35052 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
GPC1P35052 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC1P35052 AC034268.1-201ENST00000441047 882 ntBASIC19.39■□□□□ 0.69
GPC1P35052 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC1P35052 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.39■□□□□ 0.69
GPC1P35052 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.39■□□□□ 0.69
GPC1P35052 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GPC1P35052 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GPC1P35052 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC1P35052 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GPC1P35052 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC1P35052 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC1P35052 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GPC1P35052 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC1P35052 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC1P35052 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC1P35052 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GPC1P35052 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GPC1P35052 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC1P35052 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GPC1P35052 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GPC1P35052 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC1P35052 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC1P35052 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC1P35052 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC1P35052 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC1P35052 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
GPC1P35052 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.38■□□□□ 0.69
GPC1P35052 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC1P35052 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.38■□□□□ 0.69
GPC1P35052 AC138932.1-201ENST00000534164 6830 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms