Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GABRB3P28472 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GABRB3P28472 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.41■□□□□ 0.86
GABRB3P28472 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRB3P28472 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRB3P28472 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GABRB3P28472 PKD1P6-201ENST00000343738 4769 ntBASIC20.4■□□□□ 0.86
GABRB3P28472 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRB3P28472 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRB3P28472 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.4■□□□□ 0.86
GABRB3P28472 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
GABRB3P28472 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GABRB3P28472 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.4■□□□□ 0.86
GABRB3P28472 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GABRB3P28472 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRB3P28472 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.4■□□□□ 0.86
GABRB3P28472 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.4■□□□□ 0.86
GABRB3P28472 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GABRB3P28472 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.4■□□□□ 0.86
GABRB3P28472 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRB3P28472 MIR2861-201ENST00000636310 90 ntBASIC20.4■□□□□ 0.86
GABRB3P28472 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRB3P28472 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GABRB3P28472 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.39■□□□□ 0.86
GABRB3P28472 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
GABRB3P28472 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
GABRB3P28472 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GABRB3P28472 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABRB3P28472 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.39■□□□□ 0.86
GABRB3P28472 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABRB3P28472 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRB3P28472 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRB3P28472 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GABRB3P28472 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.39■□□□□ 0.85
GABRB3P28472 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.39■□□□□ 0.85
GABRB3P28472 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.39■□□□□ 0.85
GABRB3P28472 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.39■□□□□ 0.85
GABRB3P28472 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.39■□□□□ 0.85
GABRB3P28472 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRB3P28472 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GABRB3P28472 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
GABRB3P28472 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.39■□□□□ 0.85
GABRB3P28472 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.39■□□□□ 0.85
GABRB3P28472 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.39■□□□□ 0.85
GABRB3P28472 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRB3P28472 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRB3P28472 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRB3P28472 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GABRB3P28472 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
GABRB3P28472 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRB3P28472 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.38■□□□□ 0.85
GABRB3P28472 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRB3P28472 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
GABRB3P28472 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRB3P28472 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRB3P28472 KRT19P1-201ENST00000405746 1186 ntBASIC20.38■□□□□ 0.85
GABRB3P28472 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
GABRB3P28472 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GABRB3P28472 UBE2DNL-204ENST00000602536 740 ntBASIC20.38■□□□□ 0.85
GABRB3P28472 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GABRB3P28472 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRB3P28472 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
GABRB3P28472 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRB3P28472 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GABRB3P28472 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.38■□□□□ 0.85
GABRB3P28472 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GABRB3P28472 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABRB3P28472 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.37■□□□□ 0.85
GABRB3P28472 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABRB3P28472 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABRB3P28472 AC099778.1-201ENST00000568593 1911 ntBASIC20.37■□□□□ 0.85
GABRB3P28472 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GABRB3P28472 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GABRB3P28472 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.37■□□□□ 0.85
GABRB3P28472 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
GABRB3P28472 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABRB3P28472 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
GABRB3P28472 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.37■□□□□ 0.85
GABRB3P28472 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.37■□□□□ 0.85
GABRB3P28472 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABRB3P28472 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.37■□□□□ 0.85
GABRB3P28472 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GABRB3P28472 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GABRB3P28472 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABRB3P28472 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.37■□□□□ 0.85
GABRB3P28472 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
GABRB3P28472 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABRB3P28472 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.37■□□□□ 0.85
GABRB3P28472 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.37■□□□□ 0.85
GABRB3P28472 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
GABRB3P28472 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABRB3P28472 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABRB3P28472 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.36■□□□□ 0.85
GABRB3P28472 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
GABRB3P28472 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABRB3P28472 AC092720.2-201ENST00000602388 1665 ntBASIC20.36■□□□□ 0.85
GABRB3P28472 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
GABRB3P28472 AC097381.1-201ENST00000429019 1296 ntBASIC20.36■□□□□ 0.85
GABRB3P28472 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
GABRB3P28472 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms