Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDF1P27539 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GDF1P27539 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
GDF1P27539 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDF1P27539 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDF1P27539 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.63■□□□□ 0.57
GDF1P27539 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDF1P27539 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDF1P27539 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDF1P27539 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.63■□□□□ 0.57
GDF1P27539 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.63■□□□□ 0.57
GDF1P27539 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDF1P27539 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GDF1P27539 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDF1P27539 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GDF1P27539 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.63■□□□□ 0.57
GDF1P27539 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GDF1P27539 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.63■□□□□ 0.57
GDF1P27539 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.63■□□□□ 0.57
GDF1P27539 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GDF1P27539 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDF1P27539 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.63■□□□□ 0.57
GDF1P27539 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GDF1P27539 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
GDF1P27539 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GDF1P27539 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.63■□□□□ 0.57
GDF1P27539 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDF1P27539 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDF1P27539 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDF1P27539 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDF1P27539 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
GDF1P27539 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDF1P27539 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDF1P27539 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.62■□□□□ 0.57
GDF1P27539 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDF1P27539 AC083880.1-201ENST00000608266 535 ntBASIC18.62■□□□□ 0.57
GDF1P27539 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.62■□□□□ 0.57
GDF1P27539 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GDF1P27539 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDF1P27539 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GDF1P27539 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.62■□□□□ 0.57
GDF1P27539 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
GDF1P27539 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GDF1P27539 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
GDF1P27539 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GDF1P27539 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GDF1P27539 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GDF1P27539 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDF1P27539 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GDF1P27539 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
GDF1P27539 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDF1P27539 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.61■□□□□ 0.57
GDF1P27539 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
GDF1P27539 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GDF1P27539 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GDF1P27539 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.61■□□□□ 0.57
GDF1P27539 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
GDF1P27539 PGM5P4-201ENST00000421970 445 ntBASIC18.61■□□□□ 0.57
GDF1P27539 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.61■□□□□ 0.57
GDF1P27539 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.61■□□□□ 0.57
GDF1P27539 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.61■□□□□ 0.57
GDF1P27539 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GDF1P27539 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.61■□□□□ 0.57
GDF1P27539 MYC-209ENST00000641252 345 ntBASIC18.61■□□□□ 0.57
GDF1P27539 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GDF1P27539 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.6■□□□□ 0.57
GDF1P27539 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDF1P27539 AL049796.1-201ENST00000565336 1766 ntBASIC18.6■□□□□ 0.57
GDF1P27539 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDF1P27539 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDF1P27539 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
GDF1P27539 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDF1P27539 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDF1P27539 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDF1P27539 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.6■□□□□ 0.57
GDF1P27539 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.6■□□□□ 0.57
GDF1P27539 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.6■□□□□ 0.57
GDF1P27539 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.6■□□□□ 0.57
GDF1P27539 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.6■□□□□ 0.57
GDF1P27539 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
GDF1P27539 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.6■□□□□ 0.57
GDF1P27539 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.6■□□□□ 0.57
GDF1P27539 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GDF1P27539 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GDF1P27539 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.6■□□□□ 0.57
GDF1P27539 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.59■□□□□ 0.57
GDF1P27539 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDF1P27539 AC011484.1-201ENST00000377652 1995 ntBASIC18.59■□□□□ 0.57
GDF1P27539 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDF1P27539 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.59■□□□□ 0.57
GDF1P27539 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GDF1P27539 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GDF1P27539 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.59■□□□□ 0.57
GDF1P27539 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.59■□□□□ 0.57
GDF1P27539 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.59■□□□□ 0.57
GDF1P27539 AC105020.6-201ENST00000621523 1217 ntBASIC18.59■□□□□ 0.57
GDF1P27539 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.59■□□□□ 0.57
GDF1P27539 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.59■□□□□ 0.57
GDF1P27539 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDF1P27539 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms