Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.73■□□□□ 0.43
CD40P25942 PGM5P4-201ENST00000421970 445 ntBASIC17.73■□□□□ 0.43
CD40P25942 POU5F1P3-201ENST00000428824 1078 ntBASIC17.73■□□□□ 0.43
CD40P25942 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.73■□□□□ 0.43
CD40P25942 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CD40P25942 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD40P25942 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD40P25942 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD40P25942 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD40P25942 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.72■□□□□ 0.43
CD40P25942 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.72■□□□□ 0.43
CD40P25942 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.72■□□□□ 0.43
CD40P25942 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CD40P25942 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 AC011484.1-201ENST00000377652 1995 ntBASIC17.72■□□□□ 0.43
CD40P25942 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CD40P25942 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CD40P25942 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.72■□□□□ 0.43
CD40P25942 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.72■□□□□ 0.43
CD40P25942 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CD40P25942 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.72■□□□□ 0.43
CD40P25942 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.72■□□□□ 0.43
CD40P25942 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD40P25942 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD40P25942 AL024507.2-201ENST00000606070 2574 ntBASIC17.71■□□□□ 0.43
CD40P25942 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CD40P25942 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD40P25942 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD40P25942 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD40P25942 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.71■□□□□ 0.43
CD40P25942 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.71■□□□□ 0.43
CD40P25942 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.71■□□□□ 0.43
CD40P25942 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.71■□□□□ 0.43
CD40P25942 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CD40P25942 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.71■□□□□ 0.43
CD40P25942 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.71■□□□□ 0.43
CD40P25942 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD40P25942 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.71■□□□□ 0.43
CD40P25942 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CD40P25942 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.71■□□□□ 0.43
CD40P25942 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.71■□□□□ 0.43
CD40P25942 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CD40P25942 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CD40P25942 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD40P25942 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CD40P25942 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.71■□□□□ 0.43
CD40P25942 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.71■□□□□ 0.43
CD40P25942 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CD40P25942 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CD40P25942 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD40P25942 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CD40P25942 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD40P25942 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CD40P25942 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CD40P25942 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD40P25942 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD40P25942 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CD40P25942 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD40P25942 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.7■□□□□ 0.42
CD40P25942 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD40P25942 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD40P25942 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.7■□□□□ 0.42
CD40P25942 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CD40P25942 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CD40P25942 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.7■□□□□ 0.42
CD40P25942 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.7■□□□□ 0.42
CD40P25942 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.7■□□□□ 0.42
CD40P25942 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.7■□□□□ 0.42
CD40P25942 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.7■□□□□ 0.42
CD40P25942 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.7■□□□□ 0.42
CD40P25942 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.7■□□□□ 0.42
CD40P25942 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CD40P25942 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CD40P25942 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD40P25942 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.69■□□□□ 0.42
CD40P25942 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.69■□□□□ 0.42
CD40P25942 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD40P25942 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CD40P25942 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.69■□□□□ 0.42
CD40P25942 AL049796.1-201ENST00000565336 1766 ntBASIC17.69■□□□□ 0.42
CD40P25942 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD40P25942 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD40P25942 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD40P25942 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD40P25942 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD40P25942 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.69■□□□□ 0.42
CD40P25942 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms