Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCND1P24385 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCND1P24385 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.56■□□□□ 0.88
CCND1P24385 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCND1P24385 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCND1P24385 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCND1P24385 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.56■□□□□ 0.88
CCND1P24385 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCND1P24385 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCND1P24385 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCND1P24385 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCND1P24385 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.55■□□□□ 0.88
CCND1P24385 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CCND1P24385 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCND1P24385 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.55■□□□□ 0.88
CCND1P24385 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.55■□□□□ 0.88
CCND1P24385 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCND1P24385 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCND1P24385 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCND1P24385 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCND1P24385 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.54■□□□□ 0.88
CCND1P24385 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCND1P24385 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCND1P24385 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCND1P24385 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCND1P24385 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCND1P24385 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCND1P24385 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.54■□□□□ 0.88
CCND1P24385 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.54■□□□□ 0.88
CCND1P24385 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.54■□□□□ 0.88
CCND1P24385 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.54■□□□□ 0.88
CCND1P24385 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.54■□□□□ 0.88
CCND1P24385 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCND1P24385 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.54■□□□□ 0.88
CCND1P24385 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.54■□□□□ 0.88
CCND1P24385 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCND1P24385 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCND1P24385 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.54■□□□□ 0.88
CCND1P24385 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCND1P24385 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.53■□□□□ 0.88
CCND1P24385 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.53■□□□□ 0.88
CCND1P24385 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.53■□□□□ 0.88
CCND1P24385 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CCND1P24385 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.53■□□□□ 0.88
CCND1P24385 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 AC073314.1-201ENST00000568729 2216 ntBASIC20.53■□□□□ 0.88
CCND1P24385 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCND1P24385 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.53■□□□□ 0.88
CCND1P24385 AC019069.1-201ENST00000610008 1333 ntBASIC20.53■□□□□ 0.88
CCND1P24385 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCND1P24385 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCND1P24385 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.52■□□□□ 0.88
CCND1P24385 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCND1P24385 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.52■□□□□ 0.88
CCND1P24385 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCND1P24385 AC079140.4-201ENST00000507448 529 ntBASIC20.52■□□□□ 0.88
CCND1P24385 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.52■□□□□ 0.88
CCND1P24385 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.52■□□□□ 0.88
CCND1P24385 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCND1P24385 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
CCND1P24385 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCND1P24385 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
CCND1P24385 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCND1P24385 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCND1P24385 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCND1P24385 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCND1P24385 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCND1P24385 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCND1P24385 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCND1P24385 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCND1P24385 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.51■□□□□ 0.87
CCND1P24385 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCND1P24385 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCND1P24385 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.51■□□□□ 0.87
CCND1P24385 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCND1P24385 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.51■□□□□ 0.87
CCND1P24385 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms