Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MMP8P22894 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.63■■□□□ 1.05
MMP8P22894 AL162412.1-201ENST00000567129 965 ntBASIC21.63■■□□□ 1.05
MMP8P22894 AC022517.1-201ENST00000592429 346 ntBASIC21.63■■□□□ 1.05
MMP8P22894 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.63■■□□□ 1.05
MMP8P22894 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
MMP8P22894 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP8P22894 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.63■■□□□ 1.05
MMP8P22894 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.63■■□□□ 1.05
MMP8P22894 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
MMP8P22894 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MMP8P22894 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MMP8P22894 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
MMP8P22894 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP8P22894 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP8P22894 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MMP8P22894 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP8P22894 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
MMP8P22894 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP8P22894 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP8P22894 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.62■■□□□ 1.05
MMP8P22894 MIR935-201ENST00000401179 91 ntBASIC21.62■■□□□ 1.05
MMP8P22894 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
MMP8P22894 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.62■■□□□ 1.05
MMP8P22894 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MMP8P22894 AC011767.1-201ENST00000617410 1153 ntBASIC21.62■■□□□ 1.05
MMP8P22894 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
MMP8P22894 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.62■■□□□ 1.05
MMP8P22894 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP8P22894 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.62■■□□□ 1.05
MMP8P22894 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.62■■□□□ 1.05
MMP8P22894 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.61■■□□□ 1.05
MMP8P22894 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP8P22894 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP8P22894 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP8P22894 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP8P22894 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.61■■□□□ 1.05
MMP8P22894 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MMP8P22894 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MMP8P22894 FAM21FP-204ENST00000608637 956 ntBASIC21.61■■□□□ 1.05
MMP8P22894 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.61■■□□□ 1.05
MMP8P22894 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.61■■□□□ 1.05
MMP8P22894 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.61■■□□□ 1.05
MMP8P22894 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.61■■□□□ 1.05
MMP8P22894 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MMP8P22894 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.61■■□□□ 1.05
MMP8P22894 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.61■■□□□ 1.05
MMP8P22894 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP8P22894 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP8P22894 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.6■■□□□ 1.05
MMP8P22894 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP8P22894 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP8P22894 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.6■■□□□ 1.05
MMP8P22894 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.6■■□□□ 1.05
MMP8P22894 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.6■■□□□ 1.05
MMP8P22894 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
MMP8P22894 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP8P22894 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP8P22894 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP8P22894 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.6■■□□□ 1.05
MMP8P22894 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
MMP8P22894 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MMP8P22894 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP8P22894 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
MMP8P22894 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MMP8P22894 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP8P22894 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP8P22894 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP8P22894 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP8P22894 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.59■■□□□ 1.05
MMP8P22894 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.59■■□□□ 1.05
MMP8P22894 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.59■■□□□ 1.05
MMP8P22894 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
MMP8P22894 AC016405.3-201ENST00000607710 860 ntBASIC21.59■■□□□ 1.05
MMP8P22894 BID-214ENST00000617586 542 ntTSL 5 BASIC21.59■■□□□ 1.05
MMP8P22894 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP8P22894 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
MMP8P22894 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
MMP8P22894 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP8P22894 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MMP8P22894 AC073130.3-201ENST00000624389 2278 ntBASIC21.58■■□□□ 1.05
MMP8P22894 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.58■■□□□ 1.05
MMP8P22894 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
MMP8P22894 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
MMP8P22894 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.58■■□□□ 1.05
MMP8P22894 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.58■■□□□ 1.05
MMP8P22894 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.58■■□□□ 1.05
MMP8P22894 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.58■■□□□ 1.05
MMP8P22894 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MMP8P22894 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
MMP8P22894 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MMP8P22894 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
MMP8P22894 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.58■■□□□ 1.04
MMP8P22894 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
MMP8P22894 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
MMP8P22894 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
MMP8P22894 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
MMP8P22894 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MMP8P22894 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.57■■□□□ 1.04
MMP8P22894 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms