Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB4AP20338 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAB4AP20338 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB4AP20338 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB4AP20338 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB4AP20338 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB4AP20338 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB4AP20338 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB4AP20338 KRT18P24-201ENST00000344739 1156 ntBASIC15.68■□□□□ 0.1
RAB4AP20338 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RAB4AP20338 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB4AP20338 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RAB4AP20338 AC129492.7-201ENST00000622992 756 ntBASIC15.68■□□□□ 0.1
RAB4AP20338 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB4AP20338 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB4AP20338 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RAB4AP20338 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB4AP20338 TNXA-203ENST00000507684 2038 ntBASIC15.68■□□□□ 0.1
RAB4AP20338 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RAB4AP20338 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB4AP20338 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB4AP20338 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RAB4AP20338 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RAB4AP20338 NEFHP1-201ENST00000412845 2629 ntBASIC15.67■□□□□ 0.1
RAB4AP20338 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.67■□□□□ 0.1
RAB4AP20338 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RAB4AP20338 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB4AP20338 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 AC004408.2-201ENST00000623613 2777 ntBASIC15.67■□□□□ 0.1
RAB4AP20338 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB4AP20338 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB4AP20338 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB4AP20338 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB4AP20338 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RAB4AP20338 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB4AP20338 OXCT2P1-201ENST00000447263 1535 ntBASIC15.67■□□□□ 0.1
RAB4AP20338 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RAB4AP20338 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB4AP20338 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB4AP20338 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAB4AP20338 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB4AP20338 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB4AP20338 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB4AP20338 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 DUX4L4-201ENST00000566884 1269 ntBASIC15.66■□□□□ 0.1
RAB4AP20338 MIR4449-201ENST00000578365 66 ntBASIC15.66■□□□□ 0.1
RAB4AP20338 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB4AP20338 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RAB4AP20338 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB4AP20338 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RAB4AP20338 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB4AP20338 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB4AP20338 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB4AP20338 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB4AP20338 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB4AP20338 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB4AP20338 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RAB4AP20338 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB4AP20338 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB4AP20338 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB4AP20338 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB4AP20338 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB4AP20338 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB4AP20338 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB4AP20338 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB4AP20338 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RAB4AP20338 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms