Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATF1P18846 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ATF1P18846 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.99■□□□□ 0.47
ATF1P18846 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
ATF1P18846 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATF1P18846 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATF1P18846 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATF1P18846 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
ATF1P18846 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.99■□□□□ 0.47
ATF1P18846 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATF1P18846 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATF1P18846 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.99■□□□□ 0.47
ATF1P18846 RASA4CP-201ENST00000424092 1398 ntBASIC17.99■□□□□ 0.47
ATF1P18846 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.99■□□□□ 0.47
ATF1P18846 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.99■□□□□ 0.47
ATF1P18846 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ATF1P18846 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATF1P18846 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ATF1P18846 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATF1P18846 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATF1P18846 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ATF1P18846 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.98■□□□□ 0.47
ATF1P18846 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.98■□□□□ 0.47
ATF1P18846 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATF1P18846 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATF1P18846 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ATF1P18846 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATF1P18846 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF1P18846 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF1P18846 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ATF1P18846 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF1P18846 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ATF1P18846 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATF1P18846 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF1P18846 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.97■□□□□ 0.47
ATF1P18846 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ATF1P18846 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF1P18846 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF1P18846 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF1P18846 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF1P18846 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.97■□□□□ 0.47
ATF1P18846 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ATF1P18846 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.97■□□□□ 0.47
ATF1P18846 AF213884.3-201ENST00000563833 479 ntBASIC17.97■□□□□ 0.47
ATF1P18846 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.97■□□□□ 0.47
ATF1P18846 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.97■□□□□ 0.47
ATF1P18846 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
ATF1P18846 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF1P18846 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.97■□□□□ 0.47
ATF1P18846 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.97■□□□□ 0.47
ATF1P18846 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATF1P18846 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.97■□□□□ 0.47
ATF1P18846 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF1P18846 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF1P18846 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.96■□□□□ 0.47
ATF1P18846 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF1P18846 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF1P18846 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.96■□□□□ 0.47
ATF1P18846 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF1P18846 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF1P18846 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATF1P18846 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATF1P18846 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.96■□□□□ 0.47
ATF1P18846 MIR939-201ENST00000401314 82 ntBASIC17.96■□□□□ 0.47
ATF1P18846 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.96■□□□□ 0.47
ATF1P18846 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.96■□□□□ 0.47
ATF1P18846 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.96■□□□□ 0.47
ATF1P18846 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.96■□□□□ 0.47
ATF1P18846 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.96■□□□□ 0.47
ATF1P18846 AC110285.6-201ENST00000617652 491 ntBASIC17.96■□□□□ 0.47
ATF1P18846 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATF1P18846 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ATF1P18846 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATF1P18846 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ATF1P18846 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.95■□□□□ 0.46
ATF1P18846 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.95■□□□□ 0.46
ATF1P18846 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ATF1P18846 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.95■□□□□ 0.46
ATF1P18846 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.95■□□□□ 0.46
ATF1P18846 AC091305.1-201ENST00000479476 895 ntBASIC17.95■□□□□ 0.46
ATF1P18846 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.95■□□□□ 0.46
ATF1P18846 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.95■□□□□ 0.46
ATF1P18846 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.95■□□□□ 0.46
ATF1P18846 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATF1P18846 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.95■□□□□ 0.46
ATF1P18846 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ATF1P18846 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.95■□□□□ 0.46
ATF1P18846 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATF1P18846 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms