Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNB2P17787 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CHRNB2P17787 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.81■■□□□ 1.08
CHRNB2P17787 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.81■■□□□ 1.08
CHRNB2P17787 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNB2P17787 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.81■■□□□ 1.08
CHRNB2P17787 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.81■■□□□ 1.08
CHRNB2P17787 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.81■■□□□ 1.08
CHRNB2P17787 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.81■■□□□ 1.08
CHRNB2P17787 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNB2P17787 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CHRNB2P17787 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
CHRNB2P17787 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNB2P17787 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHRNB2P17787 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CHRNB2P17787 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CHRNB2P17787 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.8■■□□□ 1.08
CHRNB2P17787 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 AC007322.3-201ENST00000426526 701 ntBASIC21.8■■□□□ 1.08
CHRNB2P17787 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CHRNB2P17787 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CHRNB2P17787 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHRNB2P17787 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNB2P17787 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNB2P17787 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNB2P17787 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.79■■□□□ 1.08
CHRNB2P17787 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNB2P17787 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.79■■□□□ 1.08
CHRNB2P17787 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.79■■□□□ 1.08
CHRNB2P17787 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.79■■□□□ 1.08
CHRNB2P17787 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRNB2P17787 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.79■■□□□ 1.08
CHRNB2P17787 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.79■■□□□ 1.08
CHRNB2P17787 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNB2P17787 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNB2P17787 AC010536.3-201ENST00000620306 533 ntBASIC21.79■■□□□ 1.08
CHRNB2P17787 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNB2P17787 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNB2P17787 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.79■■□□□ 1.08
CHRNB2P17787 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNB2P17787 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHRNB2P17787 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNB2P17787 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNB2P17787 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNB2P17787 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.78■■□□□ 1.08
CHRNB2P17787 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CHRNB2P17787 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRNB2P17787 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CHRNB2P17787 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRNB2P17787 TERF1P5-201ENST00000477545 1207 ntBASIC21.78■■□□□ 1.08
CHRNB2P17787 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRNB2P17787 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHRNB2P17787 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.78■■□□□ 1.08
CHRNB2P17787 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CHRNB2P17787 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.78■■□□□ 1.08
CHRNB2P17787 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNB2P17787 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNB2P17787 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNB2P17787 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CHRNB2P17787 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNB2P17787 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNB2P17787 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHRNB2P17787 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CHRNB2P17787 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.77■■□□□ 1.08
CHRNB2P17787 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.77■■□□□ 1.08
CHRNB2P17787 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.77■■□□□ 1.08
CHRNB2P17787 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CHRNB2P17787 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.77■■□□□ 1.08
CHRNB2P17787 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHRNB2P17787 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.77■■□□□ 1.07
CHRNB2P17787 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CHRNB2P17787 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNB2P17787 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNB2P17787 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.76■■□□□ 1.07
CHRNB2P17787 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
CHRNB2P17787 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNB2P17787 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHRNB2P17787 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms