Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TIMP2P16035 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TIMP2P16035 AC027702.1-201ENST00000563810 1770 ntBASIC20.54■□□□□ 0.88
TIMP2P16035 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TIMP2P16035 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TIMP2P16035 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP2P16035 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP2P16035 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP2P16035 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP2P16035 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP2P16035 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP2P16035 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP2P16035 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP2P16035 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP2P16035 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP2P16035 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP2P16035 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TIMP2P16035 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TIMP2P16035 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP2P16035 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP2P16035 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.52■□□□□ 0.88
TIMP2P16035 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.52■□□□□ 0.88
TIMP2P16035 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.52■□□□□ 0.88
TIMP2P16035 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.52■□□□□ 0.88
TIMP2P16035 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP2P16035 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP2P16035 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP2P16035 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.52■□□□□ 0.87
TIMP2P16035 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TIMP2P16035 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.51■□□□□ 0.87
TIMP2P16035 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.51■□□□□ 0.87
TIMP2P16035 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.51■□□□□ 0.87
TIMP2P16035 AL356652.1-201ENST00000615962 565 ntBASIC20.51■□□□□ 0.87
TIMP2P16035 PLK5-205ENST00000642079 1969 ntBASIC20.51■□□□□ 0.87
TIMP2P16035 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.51■□□□□ 0.87
TIMP2P16035 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TIMP2P16035 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TIMP2P16035 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.51■□□□□ 0.87
TIMP2P16035 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP2P16035 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.51■□□□□ 0.87
TIMP2P16035 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.51■□□□□ 0.87
TIMP2P16035 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.5■□□□□ 0.87
TIMP2P16035 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP2P16035 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.5■□□□□ 0.87
TIMP2P16035 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP2P16035 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP2P16035 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP2P16035 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP2P16035 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.5■□□□□ 0.87
TIMP2P16035 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.5■□□□□ 0.87
TIMP2P16035 RNA5SP413-201ENST00000516373 109 ntBASIC20.5■□□□□ 0.87
TIMP2P16035 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.5■□□□□ 0.87
TIMP2P16035 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP2P16035 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP2P16035 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.5■□□□□ 0.87
TIMP2P16035 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.5■□□□□ 0.87
TIMP2P16035 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.5■□□□□ 0.87
TIMP2P16035 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP2P16035 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.5■□□□□ 0.87
TIMP2P16035 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TIMP2P16035 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.5■□□□□ 0.87
TIMP2P16035 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.5■□□□□ 0.87
TIMP2P16035 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP2P16035 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP2P16035 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TIMP2P16035 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TIMP2P16035 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP2P16035 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP2P16035 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.49■□□□□ 0.87
TIMP2P16035 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP2P16035 PGM5P4-201ENST00000421970 445 ntBASIC20.49■□□□□ 0.87
TIMP2P16035 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.49■□□□□ 0.87
TIMP2P16035 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.49■□□□□ 0.87
TIMP2P16035 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.49■□□□□ 0.87
TIMP2P16035 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP2P16035 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.49■□□□□ 0.87
TIMP2P16035 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP2P16035 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.49■□□□□ 0.87
TIMP2P16035 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TIMP2P16035 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.49■□□□□ 0.87
TIMP2P16035 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP2P16035 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.48■□□□□ 0.87
TIMP2P16035 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP2P16035 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP2P16035 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP2P16035 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP2P16035 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms