Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.39■□□□□ 0.53
MRPL3P09001 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL3P09001 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MRPL3P09001 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MRPL3P09001 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL3P09001 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.38■□□□□ 0.53
MRPL3P09001 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.38■□□□□ 0.53
MRPL3P09001 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.38■□□□□ 0.53
MRPL3P09001 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.38■□□□□ 0.53
MRPL3P09001 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL3P09001 AP004607.4-201ENST00000530158 1459 ntBASIC18.38■□□□□ 0.53
MRPL3P09001 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL3P09001 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL3P09001 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MRPL3P09001 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MRPL3P09001 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MRPL3P09001 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL3P09001 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL3P09001 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL3P09001 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL3P09001 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.37■□□□□ 0.53
MRPL3P09001 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.37■□□□□ 0.53
MRPL3P09001 AP001330.3-201ENST00000520123 633 ntBASIC18.37■□□□□ 0.53
MRPL3P09001 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.37■□□□□ 0.53
MRPL3P09001 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
MRPL3P09001 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
MRPL3P09001 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL3P09001 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL3P09001 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL3P09001 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
MRPL3P09001 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL3P09001 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MRPL3P09001 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
MRPL3P09001 AC099778.1-201ENST00000568593 1911 ntBASIC18.37■□□□□ 0.53
MRPL3P09001 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.37■□□□□ 0.53
MRPL3P09001 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MRPL3P09001 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL3P09001 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL3P09001 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.36■□□□□ 0.53
MRPL3P09001 MIR572-201ENST00000384983 95 ntBASIC18.36■□□□□ 0.53
MRPL3P09001 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MRPL3P09001 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.36■□□□□ 0.53
MRPL3P09001 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.36■□□□□ 0.53
MRPL3P09001 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.36■□□□□ 0.53
MRPL3P09001 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MRPL3P09001 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL3P09001 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MRPL3P09001 EEF1DP3-203ENST00000566025 782 ntBASIC18.36■□□□□ 0.53
MRPL3P09001 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL3P09001 AL162377.1-201ENST00000618844 1793 ntBASIC18.36■□□□□ 0.53
MRPL3P09001 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.36■□□□□ 0.53
MRPL3P09001 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.36■□□□□ 0.53
MRPL3P09001 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL3P09001 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MRPL3P09001 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.35■□□□□ 0.53
MRPL3P09001 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.35■□□□□ 0.53
MRPL3P09001 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.35■□□□□ 0.53
MRPL3P09001 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.35■□□□□ 0.53
MRPL3P09001 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MRPL3P09001 AC053503.5-201ENST00000601508 636 ntBASIC18.35■□□□□ 0.53
MRPL3P09001 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MRPL3P09001 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MRPL3P09001 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
MRPL3P09001 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MRPL3P09001 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL3P09001 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.34■□□□□ 0.53
MRPL3P09001 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL3P09001 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.34■□□□□ 0.53
MRPL3P09001 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL3P09001 AC008406.3-201ENST00000620001 1374 ntBASIC18.34■□□□□ 0.53
MRPL3P09001 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL3P09001 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.34■□□□□ 0.53
MRPL3P09001 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.34■□□□□ 0.53
MRPL3P09001 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL3P09001 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL3P09001 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.34■□□□□ 0.53
MRPL3P09001 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL3P09001 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL3P09001 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL3P09001 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MRPL3P09001 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.33■□□□□ 0.53
MRPL3P09001 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MRPL3P09001 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.33■□□□□ 0.53
MRPL3P09001 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MRPL3P09001 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MRPL3P09001 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MRPL3P09001 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.33■□□□□ 0.53
MRPL3P09001 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms