Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.97■■□□□ 1.11
TUBB4AP04350 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.97■■□□□ 1.11
TUBB4AP04350 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.97■■□□□ 1.11
TUBB4AP04350 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.97■■□□□ 1.11
TUBB4AP04350 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TUBB4AP04350 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TUBB4AP04350 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TUBB4AP04350 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.96■■□□□ 1.11
TUBB4AP04350 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
TUBB4AP04350 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TUBB4AP04350 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TUBB4AP04350 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
TUBB4AP04350 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TUBB4AP04350 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TUBB4AP04350 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TUBB4AP04350 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.96■■□□□ 1.11
TUBB4AP04350 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.96■■□□□ 1.11
TUBB4AP04350 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TUBB4AP04350 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TUBB4AP04350 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TUBB4AP04350 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.96■■□□□ 1.11
TUBB4AP04350 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
TUBB4AP04350 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TUBB4AP04350 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TUBB4AP04350 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TUBB4AP04350 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TUBB4AP04350 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TUBB4AP04350 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TUBB4AP04350 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TUBB4AP04350 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.95■■□□□ 1.1
TUBB4AP04350 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.95■■□□□ 1.1
TUBB4AP04350 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TUBB4AP04350 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TUBB4AP04350 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.95■■□□□ 1.1
TUBB4AP04350 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TUBB4AP04350 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TUBB4AP04350 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TUBB4AP04350 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TUBB4AP04350 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.95■■□□□ 1.1
TUBB4AP04350 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.95■■□□□ 1.1
TUBB4AP04350 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TUBB4AP04350 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TUBB4AP04350 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TUBB4AP04350 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TUBB4AP04350 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TUBB4AP04350 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.94■■□□□ 1.1
TUBB4AP04350 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TUBB4AP04350 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TUBB4AP04350 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.94■■□□□ 1.1
TUBB4AP04350 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TUBB4AP04350 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TUBB4AP04350 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TUBB4AP04350 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TUBB4AP04350 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.94■■□□□ 1.1
TUBB4AP04350 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TUBB4AP04350 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.94■■□□□ 1.1
TUBB4AP04350 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TUBB4AP04350 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TUBB4AP04350 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TUBB4AP04350 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TUBB4AP04350 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TUBB4AP04350 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
TUBB4AP04350 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TUBB4AP04350 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.93■■□□□ 1.1
TUBB4AP04350 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TUBB4AP04350 AP005435.1-201ENST00000529293 1178 ntBASIC21.93■■□□□ 1.1
TUBB4AP04350 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.93■■□□□ 1.1
TUBB4AP04350 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TUBB4AP04350 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
TUBB4AP04350 AC055733.4-201ENST00000638462 1354 ntBASIC21.93■■□□□ 1.1
TUBB4AP04350 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.93■■□□□ 1.1
TUBB4AP04350 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TUBB4AP04350 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.92■■□□□ 1.1
TUBB4AP04350 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
TUBB4AP04350 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
TUBB4AP04350 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.92■■□□□ 1.1
TUBB4AP04350 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TUBB4AP04350 MIR3181-201ENST00000578512 73 ntBASIC21.92■■□□□ 1.1
TUBB4AP04350 AC010997.5-201ENST00000609182 354 ntBASIC21.92■■□□□ 1.1
TUBB4AP04350 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.92■■□□□ 1.1
TUBB4AP04350 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TUBB4AP04350 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.92■■□□□ 1.1
TUBB4AP04350 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.91■■□□□ 1.1
TUBB4AP04350 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TUBB4AP04350 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TUBB4AP04350 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TUBB4AP04350 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TUBB4AP04350 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TUBB4AP04350 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms