Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.89■■□□□ 1.57
COL1A1P02452 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
COL1A1P02452 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
COL1A1P02452 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
COL1A1P02452 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
COL1A1P02452 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.89■■□□□ 1.57
COL1A1P02452 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.57
COL1A1P02452 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.89■■□□□ 1.57
COL1A1P02452 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
COL1A1P02452 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
COL1A1P02452 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.88■■□□□ 1.57
COL1A1P02452 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC24.88■■□□□ 1.57
COL1A1P02452 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.88■■□□□ 1.57
COL1A1P02452 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.88■■□□□ 1.57
COL1A1P02452 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 AC092368.3-202ENST00000574180 1591 ntBASIC24.88■■□□□ 1.57
COL1A1P02452 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL1A1P02452 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.87■■□□□ 1.57
COL1A1P02452 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL1A1P02452 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
COL1A1P02452 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.87■■□□□ 1.57
COL1A1P02452 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
COL1A1P02452 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.87■■□□□ 1.57
COL1A1P02452 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.87■■□□□ 1.57
COL1A1P02452 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.87■■□□□ 1.57
COL1A1P02452 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL1A1P02452 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.87■■□□□ 1.57
COL1A1P02452 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.87■■□□□ 1.57
COL1A1P02452 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
COL1A1P02452 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
COL1A1P02452 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.86■■□□□ 1.57
COL1A1P02452 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.86■■□□□ 1.57
COL1A1P02452 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
COL1A1P02452 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL1A1P02452 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
COL1A1P02452 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
COL1A1P02452 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.86■■□□□ 1.57
COL1A1P02452 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.86■■□□□ 1.57
COL1A1P02452 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC24.86■■□□□ 1.57
COL1A1P02452 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
COL1A1P02452 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL1A1P02452 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
COL1A1P02452 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL1A1P02452 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
COL1A1P02452 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.86■■□□□ 1.57
COL1A1P02452 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A1P02452 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A1P02452 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A1P02452 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A1P02452 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A1P02452 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A1P02452 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.85■■□□□ 1.57
COL1A1P02452 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A1P02452 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A1P02452 SOX15-203ENST00000570788 1093 ntBASIC24.85■■□□□ 1.57
COL1A1P02452 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.85■■□□□ 1.57
COL1A1P02452 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.85■■□□□ 1.57
COL1A1P02452 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A1P02452 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.85■■□□□ 1.57
COL1A1P02452 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC24.85■■□□□ 1.57
COL1A1P02452 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.85■■□□□ 1.57
COL1A1P02452 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
COL1A1P02452 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.85■■□□□ 1.57
COL1A1P02452 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A1P02452 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL1A1P02452 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC24.84■■□□□ 1.57
COL1A1P02452 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.84■■□□□ 1.57
COL1A1P02452 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC24.84■■□□□ 1.57
COL1A1P02452 AL356652.1-201ENST00000615962 565 ntBASIC24.84■■□□□ 1.57
COL1A1P02452 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL1A1P02452 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL1A1P02452 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.84■■□□□ 1.57
COL1A1P02452 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
COL1A1P02452 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL1A1P02452 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
COL1A1P02452 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL1A1P02452 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
COL1A1P02452 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC24.83■■□□□ 1.57
COL1A1P02452 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.83■■□□□ 1.57
COL1A1P02452 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC24.83■■□□□ 1.57
COL1A1P02452 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL1A1P02452 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL1A1P02452 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
COL1A1P02452 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC24.83■■□□□ 1.57
COL1A1P02452 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
COL1A1P02452 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
COL1A1P02452 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
COL1A1P02452 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms