Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBC1P01850 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBC1P01850 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBC1P01850 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBC1P01850 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.58■□□□□ 0.89
TRBC1P01850 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRBC1P01850 ID1-201ENST00000376105 1233 ntBASIC20.58■□□□□ 0.89
TRBC1P01850 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBC1P01850 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBC1P01850 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TRBC1P01850 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRBC1P01850 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBC1P01850 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBC1P01850 AC104771.1-201ENST00000603335 964 ntBASIC20.58■□□□□ 0.89
TRBC1P01850 AL109923.1-201ENST00000618799 583 ntBASIC20.58■□□□□ 0.89
TRBC1P01850 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRBC1P01850 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRBC1P01850 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBC1P01850 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBC1P01850 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBC1P01850 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBC1P01850 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBC1P01850 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TRBC1P01850 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRBC1P01850 MCRIP2P1-201ENST00000394346 511 ntBASIC20.57■□□□□ 0.88
TRBC1P01850 HLA-L-209ENST00000420110 1011 ntBASIC20.57■□□□□ 0.88
TRBC1P01850 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRBC1P01850 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBC1P01850 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBC1P01850 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.57■□□□□ 0.88
TRBC1P01850 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.57■□□□□ 0.88
TRBC1P01850 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRBC1P01850 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBC1P01850 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBC1P01850 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBC1P01850 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBC1P01850 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBC1P01850 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBC1P01850 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRBC1P01850 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBC1P01850 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBC1P01850 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBC1P01850 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBC1P01850 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBC1P01850 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBC1P01850 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRBC1P01850 SLC29A4P1-201ENST00000398760 971 ntBASIC20.56■□□□□ 0.88
TRBC1P01850 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRBC1P01850 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBC1P01850 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBC1P01850 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBC1P01850 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBC1P01850 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRBC1P01850 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRBC1P01850 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRBC1P01850 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBC1P01850 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.55■□□□□ 0.88
TRBC1P01850 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBC1P01850 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBC1P01850 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBC1P01850 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBC1P01850 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBC1P01850 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBC1P01850 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.55■□□□□ 0.88
TRBC1P01850 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBC1P01850 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRBC1P01850 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBC1P01850 AL355472.2-201ENST00000422958 438 ntBASIC20.55■□□□□ 0.88
TRBC1P01850 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.55■□□□□ 0.88
TRBC1P01850 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.55■□□□□ 0.88
TRBC1P01850 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.55■□□□□ 0.88
TRBC1P01850 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBC1P01850 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.55■□□□□ 0.88
TRBC1P01850 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.55■□□□□ 0.88
TRBC1P01850 CYP2T3P-201ENST00000601990 817 ntBASIC20.55■□□□□ 0.88
TRBC1P01850 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBC1P01850 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.55■□□□□ 0.88
TRBC1P01850 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRBC1P01850 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBC1P01850 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRBC1P01850 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.54■□□□□ 0.88
TRBC1P01850 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBC1P01850 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBC1P01850 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.54■□□□□ 0.88
TRBC1P01850 AC087633.2-202ENST00000565166 1439 ntBASIC20.54■□□□□ 0.88
TRBC1P01850 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TRBC1P01850 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.54■□□□□ 0.88
TRBC1P01850 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBC1P01850 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRBC1P01850 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRBC1P01850 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
TRBC1P01850 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBC1P01850 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBC1P01850 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.54■□□□□ 0.88
TRBC1P01850 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.54■□□□□ 0.88
TRBC1P01850 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
TRBC1P01850 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.54■□□□□ 0.88
TRBC1P01850 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.54■□□□□ 0.88
TRBC1P01850 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.54■□□□□ 0.88
TRBC1P01850 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms