Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NDUFS3O75489 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.44■□□□□ 0.86
NDUFS3O75489 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.44■□□□□ 0.86
NDUFS3O75489 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.44■□□□□ 0.86
NDUFS3O75489 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.44■□□□□ 0.86
NDUFS3O75489 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFS3O75489 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.44■□□□□ 0.86
NDUFS3O75489 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.44■□□□□ 0.86
NDUFS3O75489 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NDUFS3O75489 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.43■□□□□ 0.86
NDUFS3O75489 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.43■□□□□ 0.86
NDUFS3O75489 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFS3O75489 AL162430.1-201ENST00000480705 870 ntBASIC20.43■□□□□ 0.86
NDUFS3O75489 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.43■□□□□ 0.86
NDUFS3O75489 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NDUFS3O75489 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFS3O75489 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFS3O75489 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.43■□□□□ 0.86
NDUFS3O75489 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFS3O75489 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
NDUFS3O75489 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.43■□□□□ 0.86
NDUFS3O75489 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFS3O75489 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFS3O75489 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
NDUFS3O75489 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFS3O75489 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.42■□□□□ 0.86
NDUFS3O75489 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFS3O75489 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.42■□□□□ 0.86
NDUFS3O75489 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.42■□□□□ 0.86
NDUFS3O75489 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.42■□□□□ 0.86
NDUFS3O75489 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFS3O75489 AC007322.3-201ENST00000426526 701 ntBASIC20.42■□□□□ 0.86
NDUFS3O75489 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFS3O75489 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.42■□□□□ 0.86
NDUFS3O75489 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
NDUFS3O75489 AC010536.3-201ENST00000620306 533 ntBASIC20.42■□□□□ 0.86
NDUFS3O75489 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFS3O75489 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFS3O75489 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NDUFS3O75489 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.41■□□□□ 0.86
NDUFS3O75489 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFS3O75489 AC027702.1-201ENST00000563810 1770 ntBASIC20.41■□□□□ 0.86
NDUFS3O75489 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFS3O75489 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.41■□□□□ 0.86
NDUFS3O75489 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NDUFS3O75489 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NDUFS3O75489 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
NDUFS3O75489 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.41■□□□□ 0.86
NDUFS3O75489 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NDUFS3O75489 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.41■□□□□ 0.86
NDUFS3O75489 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NDUFS3O75489 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.41■□□□□ 0.86
NDUFS3O75489 CDV3P1-201ENST00000471403 739 ntBASIC20.41■□□□□ 0.86
NDUFS3O75489 TERF1P5-201ENST00000477545 1207 ntBASIC20.41■□□□□ 0.86
NDUFS3O75489 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NDUFS3O75489 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFS3O75489 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFS3O75489 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NDUFS3O75489 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NDUFS3O75489 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFS3O75489 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFS3O75489 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NDUFS3O75489 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFS3O75489 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFS3O75489 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFS3O75489 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFS3O75489 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFS3O75489 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
NDUFS3O75489 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NDUFS3O75489 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFS3O75489 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.4■□□□□ 0.86
NDUFS3O75489 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.4■□□□□ 0.86
NDUFS3O75489 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
NDUFS3O75489 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NDUFS3O75489 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.4■□□□□ 0.86
NDUFS3O75489 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
NDUFS3O75489 LINC01006-201ENST00000333319 2292 ntBASIC20.39■□□□□ 0.86
NDUFS3O75489 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NDUFS3O75489 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NDUFS3O75489 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.39■□□□□ 0.86
NDUFS3O75489 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.39■□□□□ 0.85
NDUFS3O75489 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFS3O75489 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
NDUFS3O75489 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFS3O75489 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFS3O75489 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.39■□□□□ 0.85
NDUFS3O75489 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFS3O75489 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NDUFS3O75489 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFS3O75489 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.39■□□□□ 0.85
NDUFS3O75489 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.39■□□□□ 0.85
NDUFS3O75489 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms