Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 MIR4466-201ENST00000606121 54 ntBASIC20.7■□□□□ 0.9
CDH16O75309 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH16O75309 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH16O75309 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CDH16O75309 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH16O75309 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH16O75309 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDH16O75309 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH16O75309 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH16O75309 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH16O75309 AP004607.4-201ENST00000530158 1459 ntBASIC20.69■□□□□ 0.9
CDH16O75309 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDH16O75309 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH16O75309 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH16O75309 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CDH16O75309 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH16O75309 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH16O75309 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH16O75309 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.69■□□□□ 0.9
CDH16O75309 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH16O75309 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH16O75309 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH16O75309 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDH16O75309 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDH16O75309 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH16O75309 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH16O75309 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH16O75309 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDH16O75309 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH16O75309 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
CDH16O75309 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.68■□□□□ 0.9
CDH16O75309 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH16O75309 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.68■□□□□ 0.9
CDH16O75309 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
CDH16O75309 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDH16O75309 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH16O75309 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDH16O75309 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH16O75309 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 AC018445.3-201ENST00000624177 1945 ntBASIC20.67■□□□□ 0.9
CDH16O75309 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH16O75309 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDH16O75309 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDH16O75309 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH16O75309 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDH16O75309 AC116562.4-201ENST00000641316 2276 ntBASIC20.67■□□□□ 0.9
CDH16O75309 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH16O75309 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH16O75309 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH16O75309 BX323043.1-201ENST00000641006 1765 ntBASIC20.67■□□□□ 0.9
CDH16O75309 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH16O75309 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH16O75309 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH16O75309 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH16O75309 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH16O75309 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDH16O75309 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH16O75309 IGHV3-19-201ENST00000521488 291 ntBASIC20.66■□□□□ 0.9
CDH16O75309 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDH16O75309 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH16O75309 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH16O75309 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH16O75309 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH16O75309 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH16O75309 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDH16O75309 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH16O75309 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CDH16O75309 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH16O75309 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CDH16O75309 AL020996.1-203ENST00000536896 2307 ntBASIC20.66■□□□□ 0.9
CDH16O75309 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH16O75309 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CDH16O75309 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH16O75309 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms