Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
URB1O60287 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
URB1O60287 AC007322.3-201ENST00000426526 701 ntBASIC19.4■□□□□ 0.7
URB1O60287 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.4■□□□□ 0.7
URB1O60287 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
URB1O60287 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
URB1O60287 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
URB1O60287 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
URB1O60287 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
URB1O60287 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
URB1O60287 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.39■□□□□ 0.7
URB1O60287 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
URB1O60287 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
URB1O60287 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
URB1O60287 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.39■□□□□ 0.69
URB1O60287 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
URB1O60287 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
URB1O60287 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.39■□□□□ 0.69
URB1O60287 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
URB1O60287 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
URB1O60287 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
URB1O60287 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
URB1O60287 AC113347.1-201ENST00000413321 391 ntBASIC19.39■□□□□ 0.69
URB1O60287 KRT18P57-201ENST00000443599 1254 ntBASIC19.39■□□□□ 0.69
URB1O60287 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.39■□□□□ 0.69
URB1O60287 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.39■□□□□ 0.69
URB1O60287 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
URB1O60287 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
URB1O60287 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.38■□□□□ 0.69
URB1O60287 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
URB1O60287 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
URB1O60287 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.38■□□□□ 0.69
URB1O60287 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.38■□□□□ 0.69
URB1O60287 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
URB1O60287 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.38■□□□□ 0.69
URB1O60287 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.38■□□□□ 0.69
URB1O60287 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
URB1O60287 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.38■□□□□ 0.69
URB1O60287 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.38■□□□□ 0.69
URB1O60287 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
URB1O60287 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
URB1O60287 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
URB1O60287 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
URB1O60287 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
URB1O60287 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.37■□□□□ 0.69
URB1O60287 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.37■□□□□ 0.69
URB1O60287 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.37■□□□□ 0.69
URB1O60287 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.37■□□□□ 0.69
URB1O60287 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
URB1O60287 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.37■□□□□ 0.69
URB1O60287 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.37■□□□□ 0.69
URB1O60287 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
URB1O60287 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.37■□□□□ 0.69
URB1O60287 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.37■□□□□ 0.69
URB1O60287 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.37■□□□□ 0.69
URB1O60287 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
URB1O60287 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
URB1O60287 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
URB1O60287 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
URB1O60287 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
URB1O60287 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
URB1O60287 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.36■□□□□ 0.69
URB1O60287 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
URB1O60287 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.36■□□□□ 0.69
URB1O60287 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
URB1O60287 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
URB1O60287 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
URB1O60287 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
URB1O60287 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
URB1O60287 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
URB1O60287 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.36■□□□□ 0.69
URB1O60287 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
URB1O60287 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.36■□□□□ 0.69
URB1O60287 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.36■□□□□ 0.69
URB1O60287 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.36■□□□□ 0.69
URB1O60287 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
URB1O60287 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.36■□□□□ 0.69
URB1O60287 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
URB1O60287 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
URB1O60287 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
URB1O60287 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.35■□□□□ 0.69
URB1O60287 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.35■□□□□ 0.69
URB1O60287 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
URB1O60287 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
URB1O60287 MMP23A-201ENST00000234610 1017 ntBASIC19.35■□□□□ 0.69
URB1O60287 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.35■□□□□ 0.69
URB1O60287 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.35■□□□□ 0.69
URB1O60287 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms