Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.28■□□□□ 0.04
SNAI2O43623 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SNAI2O43623 RARRES2P1-201ENST00000474487 481 ntBASIC15.28■□□□□ 0.04
SNAI2O43623 AL138724.1-201ENST00000606771 1088 ntBASIC15.28■□□□□ 0.04
SNAI2O43623 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SNAI2O43623 HCG11-201ENST00000411553 5696 ntBASIC15.28■□□□□ 0.04
SNAI2O43623 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNAI2O43623 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNAI2O43623 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SNAI2O43623 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNAI2O43623 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNAI2O43623 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
SNAI2O43623 AC090340.1-201ENST00000620778 4980 ntBASIC15.27■□□□□ 0.04
SNAI2O43623 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNAI2O43623 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNAI2O43623 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNAI2O43623 AC027702.1-201ENST00000563810 1770 ntBASIC15.27■□□□□ 0.04
SNAI2O43623 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SNAI2O43623 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNAI2O43623 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.27■□□□□ 0.04
SNAI2O43623 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SNAI2O43623 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNAI2O43623 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.27■□□□□ 0.04
SNAI2O43623 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNAI2O43623 MIR3621-201ENST00000580529 85 ntBASIC15.27■□□□□ 0.04
SNAI2O43623 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNAI2O43623 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNAI2O43623 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNAI2O43623 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNAI2O43623 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SNAI2O43623 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNAI2O43623 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
SNAI2O43623 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNAI2O43623 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.27■□□□□ 0.03
SNAI2O43623 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNAI2O43623 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNAI2O43623 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SNAI2O43623 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNAI2O43623 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNAI2O43623 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.26■□□□□ 0.03
SNAI2O43623 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
SNAI2O43623 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNAI2O43623 AC020907.5-201ENST00000624372 1936 ntBASIC15.26■□□□□ 0.03
SNAI2O43623 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SNAI2O43623 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SNAI2O43623 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.26■□□□□ 0.03
SNAI2O43623 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNAI2O43623 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SNAI2O43623 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SNAI2O43623 AC007225.1-201ENST00000566331 1836 ntBASIC15.26■□□□□ 0.03
SNAI2O43623 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.26■□□□□ 0.03
SNAI2O43623 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNAI2O43623 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNAI2O43623 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNAI2O43623 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNAI2O43623 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.26■□□□□ 0.03
SNAI2O43623 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SNAI2O43623 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SNAI2O43623 AIRN-201ENST00000601203 4374 ntBASIC15.25■□□□□ 0.03
SNAI2O43623 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.25■□□□□ 0.03
SNAI2O43623 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SNAI2O43623 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SNAI2O43623 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SNAI2O43623 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SNAI2O43623 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SNAI2O43623 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.25■□□□□ 0.03
SNAI2O43623 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.25■□□□□ 0.03
SNAI2O43623 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.25■□□□□ 0.03
SNAI2O43623 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.25■□□□□ 0.03
SNAI2O43623 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNAI2O43623 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SNAI2O43623 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SNAI2O43623 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SNAI2O43623 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SNAI2O43623 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SNAI2O43623 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SNAI2O43623 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNAI2O43623 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNAI2O43623 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNAI2O43623 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNAI2O43623 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.24■□□□□ 0.03
SNAI2O43623 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.24■□□□□ 0.03
SNAI2O43623 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.24■□□□□ 0.03
SNAI2O43623 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.24■□□□□ 0.03
SNAI2O43623 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNAI2O43623 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNAI2O43623 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNAI2O43623 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNAI2O43623 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms